RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 LIMS2Q7Z4I7 341 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 OR2I1PQ8NGU4 316 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 FBXO32Q969P5 355 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 FGFBP2Q9BYJ0 223 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ELOVL4Q9GZR5 314 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 SCAND2PQ9GZW5 306 aaPredicted RBP8.31□□□□□ -1.08
CLK1-215ENST00000621181 NACA2Q9H009 215 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 CAPN10Q9HC96 672 aa8.31□□□□□ -1.08
CLK1-215ENST00000621181 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 COCHO43405 550 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 ZNF217O75362 1048 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 TULP3O75386 442 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 CLSTN1O94985 981 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 SYPP08247 313 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 DLATP10515 647 aaKnown RBP8.3□□□□□ -1.08
CLK1-215ENST00000621181 GABRG2P18507 467 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 TNNI1P19237 187 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 YWHAQP27348 245 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 STAT6P42226 847 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 CACNA2D1P54289 1103 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 TNNC1P63316 161 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 FAM193AP78312 1265 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 HNRNPDQ14103 355 aaKnown RBP8.3□□□□□ -1.08
CLK1-215ENST00000621181 WDR72Q3MJ13 1102 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 STXBP4Q6ZWJ1 553 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 PROSER1Q86XN7 944 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 CBWD2Q8IUF1 395 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 WDR49Q8IV35 697 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 CHPFQ8IZ52 775 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 NUP93Q8N1F7 819 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 TERB1Q8NA31 727 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 ERLEC1Q96DZ1 483 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 HSPA12BQ96MM6 686 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 MRPL45Q9BRJ2 306 aaKnown RBP8.3□□□□□ -1.08
CLK1-215ENST00000621181 ZNF518BQ9C0D4 1074 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 CLSTN2Q9H4D0 955 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 PCDHB9Q9Y5E1 797 aa8.3□□□□□ -1.08
CLK1-215ENST00000621181 A8MXQ7 604 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CLDN5O00501 218 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 HOXC11O43248 304 aaPredicted RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 RTN3O95197 1032 aaPredicted RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 PTPN1P18031 435 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 NTSR1P30989 418 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 WASP42768 502 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 FOXK1P85037 733 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 PLEKHG6Q3KR16 790 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 HECTD3Q5T447 861 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SDE2Q6IQ49 451 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TRAPPC11Q7Z392 1133 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 BBS7Q8IWZ6 715 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 ETFBKMTQ8IXQ9 262 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TRIML1Q8N9V2 468 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 RDH13Q8NBN7 331 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 B3GALNT2Q8NCR0 500 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 UBE2Q2Q8WVN8 375 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 OVCA2Q8WZ82 227 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 DPEP3Q9H4B8 488 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SPHK2Q9NRA0 654 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TMEM30AQ9NV96 361 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 HSPBP1Q9NZL4 362 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CHORDC1Q9UHD1 332 aaPredicted RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 BPTFQ12830 3046 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 IGHV1OR15-9A0A0B4J2B8 117 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 A0A1W2PQD8 194 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 FRMD3A2A2Y4 597 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 NEDD8-MDP1E9PL57 170 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TAF4O00268 1085 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 NDUFS2O75306 463 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TACC1O75410 805 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 IRF1P10914 325 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CD59P13987 128 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 GNSP15586 552 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 NDUFV2P19404 249 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TUBP50607 506 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CEBPZQ03701 1054 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 TYRO3Q06418 890 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SLC14A1Q13336 389 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 TRIP6Q15654 476 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 SNRNP35Q16560 246 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SYCP2LQ5T4T6 812 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 TMEM25Q86YD3 366 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 MIB1Q86YT6 1006 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SLC41A1Q8IVJ1 513 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CCDC65Q8IXS2 484 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 SCAMP5Q8TAC9 235 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
CLK1-215ENST00000621181 CAMK1GQ96NX5 476 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 CLIC6Q96NY7 704 aa8.29□□□□□ -1.08
CLK1-215ENST00000621181 KCNK16Q96T55 309 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms