RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TMEM121Q9BTD3 319 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TMEM109Q9BVC6 243 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CISHQ9NSE2 258 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 A0A0B4J269 797 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PIK3R2O00459 728 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 SNX3O60493 162 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CSDE1O75534 798 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 TNNC2P02585 160 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PRKCBP05771 671 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CALB1P05937 261 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PECAM1P16284 738 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 UBA1P22314 1058 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 CA4P22748 312 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 IVDP26440 423 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TCF7P36402 384 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 RAP1GAPP47736 663 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RTP1P59025 263 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 IL9RQ01113 521 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 GHRHRQ02643 423 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RING1Q06587 406 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 STAT4Q14765 748 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PLCB4Q15147 1175 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 DUOXA2Q1HG44 320 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 HHATQ5VTY9 493 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 FAM160B1Q5W0V3 765 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TXNRD3NBQ6F5E7 133 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZNF280DQ6N043 979 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 VSTM1Q6UX27 236 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 C15orf39Q6ZRI6 1047 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 SPATA21Q7Z572 469 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ANKS1BQ7Z6G8 1248 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RNF180Q86T96 592 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 VSIG1Q86XK7 387 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RCOR2Q8IZ40 523 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CRIPAKQ8N1N5 446 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 EMC1Q8N766 993 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TRAPPC12Q8WVT3 735 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RSAD2Q8WXG1 361 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 P3H4Q92791 437 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CAMKK2Q96RR4 588 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CALN1Q9BXU9 219 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 MRPL4Q9BYD3 311 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 PITPNM3Q9BZ71 974 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZNF700Q9H0M5 742 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZMYM5Q9UJ78 669 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TPX2Q9ULW0 747 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 ATAD5Q96QE3 1844 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 C19orf81C9J6K1 198 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 BANF1O75531 89 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 GJB1P08034 283 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CETPP11597 493 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 EZRP15311 586 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 ABCD1P33897 745 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 BAG6P46379 1132 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 DNAJC3Q13217 504 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ITIH4Q14624 930 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 FASTKD3Q14CZ7 662 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 LY6KQ17RY6 165 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZNF568Q3ZCX4 644 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PLEKHA7Q6IQ23 1121 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 MFSD5Q6N075 450 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RHBDF2Q6PJF5 856 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 SPOCD1Q6ZMY3 1216 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CATSPERGQ6ZRH7 1159 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 CCDC91Q7Z6B0 441 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PHF13Q86YI8 300 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 KATNAL2Q8IYT4 538 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 KISS1RQ969F8 398 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZBTB10Q96DT7 871 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ECT2Q9H8V3 914 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 KIF9Q9HAQ2 790 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 PDLIM7Q9NR12 457 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 BRWD3Q6RI45 1802 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 GOLGA8RI6L899 631 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PDPK1O15530 556 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RASSF9O75901 435 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 EDN1P05305 212 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RPSAP08865 295 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 CD53P19397 219 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 MAP2K2P36507 400 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 CDH8P55286 799 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PSMC1P62191 440 aaKnown RBP5.6□□□□□ -1.51
VAPA-203ENST00000577539 WDR72Q3MJ13 1102 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TM4SF20Q53R12 229 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PPP1R21Q6ZMI0 780 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 PIGWQ7Z7B1 504 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RFX6Q8HWS3 928 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 RELL1Q8IUW5 271 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 TMEM174Q8WUU8 243 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SEPT1Q8WYJ6 367 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 HSPH1Q92598 858 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ANAPC16Q96DE5 110 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 ZFP42Q96MM3 310 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 SMC6Q96SB8 1091 aa5.6□□□□□ -1.51
VAPA-203ENST00000577539 KLF6Q99612 283 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms