RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 OR6Y1Q8NGX8 325 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PRRG3Q9BZD7 231 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 INO80BQ9C086 356 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 WDR41Q9HAD4 459 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HPS4Q9NQG7 708 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PTPRGP23470 1445 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 BTN3A3O00478 584 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CYP11B1P15538 503 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KIZQ2M2Z5 673 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RALGPS1Q5JS13 557 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MYO1HQ8N1T3 1032 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 C12orf66Q96MD2 445 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UBE2Q2LH0YL09 131 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PABPC1P11940 636 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 QPRTQ15274 297 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ALFQ53S48 1182 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SNAP47Q5SQN1 464 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM72Q6ZMU5 477 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PPP4R3CPQ6ZMV5 832 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RASSF6Q6ZTQ3 369 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TBC1D10CQ8IV04 446 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TEKT3Q9BXF9 490 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CDH2P19022 906 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 IDH3AP50213 366 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UBAP2LQ14157 1087 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ANGPTL8Q6UXH0 198 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SPATA6LQ8N4H0 392 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 STAP1Q9ULZ2 295 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 DCXO43602 365 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RAB25P57735 213 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TNFAIP2Q03169 654 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RBM12BQ8IXT5 1001 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF713Q8N859 430 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SRP68Q9UHB9 627 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ITM2AO43736 263 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PCCAP05165 728 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 XPAP23025 273 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 NUDT2P50583 147 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 GRTP1Q5TC63 336 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PPIP5K1Q6PFW1 1433 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KCTD8Q6ZWB6 473 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CENPSQ8N2Z9 138 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MTFMTQ96DP5 389 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 C8orf37Q96NL8 207 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ALG2Q9H553 416 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MKLN1Q9UL63 735 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RPL26L1Q9UNX3 145 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TESPA1A2RU30 521 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SSNA1O43805 119 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PENKP01210 267 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PCP11498 1178 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 FMO5P49326 533 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RPL10AP62906 217 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 DGCR6Q14129 220 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 C6orf183Q5T699 404 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MTMR8Q96EF0 704 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TAS2R14Q9NYV8 317 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SCRIBQ14160 1630 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC88BA6NC98 1476 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RUSC2Q8N2Y8 1516 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 WDR27A2RRH5 827 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LRRIQ4A6NIV6 560 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 VWA5AO00534 786 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MPOP05164 745 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KCNK10P57789 538 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 NFYCQ13952 458 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SLC1A5Q15758 541 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CDO1Q16878 200 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SPDYE7PQ495Y7 208 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 C2CD6Q53TS8 623 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LDLRAP1Q5SW96 308 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ATAD3BQ5T9A4 648 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CDKAL1Q5VV42 579 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TTI2Q6NXR4 508 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TXNDC11Q6PKC3 985 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZBTB38Q8NAP3 1195 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ACSBG1Q96GR2 724 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 K7ENM7 598 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 B3GALNT1O75752 331 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 STT3AP46977 705 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KPNA2P52292 529 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ECT2LQ008S8 904 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RELAQ04206 551 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UGP2Q16851 508 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 OGFOD2Q6N063 350 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KLHL35Q6PF15 583 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HEPHQ9BQS7 1158 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZSWIM1Q9BR11 485 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 STN1Q9H668 368 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TNFAIP8O95379 198 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ERVK-10P10266 1014 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MAPK12P53778 367 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 S100ZQ8WXG8 99 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MED15Q96RN5 788 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LMCD1Q9NZU5 365 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UBA2Q9UBT2 640 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CDV3Q9UKY7 258 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TMCC3Q9ULS5 477 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SNAP23O00161 211 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 GZMAP12544 262 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms