RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OR6J1Q8NGC5 347 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PCDH19Q8TAB3 1148 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.38■□□□□ 0.05
DDX55-209ENST00000542286 DENND1AQ8TEH3 1009 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 ASB7Q9H672 318 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 UGT1A7Q9HAW7 530 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 UGT1A10Q9HAW8 530 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 UGT1A8Q9HAW9 530 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 DPPA5A6NC42 116 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 MMP3P08254 477 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 GRIA1P42261 906 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 ARL4CP56559 192 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 FAM43BQ6ZT52 329 aaPredicted RBP15.37■□□□□ 0.05
DDX55-209ENST00000542286 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
DDX55-209ENST00000542286 PLD5Q8N7P1 536 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 FNIP1Q8TF40 1166 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 BRI3BPQ8WY22 251 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 SNRNP25Q9BV90 132 aaKnown RBP15.37■□□□□ 0.05
DDX55-209ENST00000542286 PHTF1Q9UMS5 762 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 GABRB2P47870 512 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 PITX1P78337 314 aaPredicted RBP15.37■□□□□ 0.05
DDX55-209ENST00000542286 TNFAIP2Q03169 654 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 GBE1Q04446 702 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 TAZQ16635 292 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 OLFML1Q6UWY5 402 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 ASRGL1Q7L266 308 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 EXOC8Q8IYI6 725 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 FAF2Q96CS3 445 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 TMEM237Q96Q45 408 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 CNPY3Q9BT09 278 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 MAF1Q9H063 256 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 GBA2Q9HCG7 927 aaPredicted RBP15.37■□□□□ 0.05
DDX55-209ENST00000542286 BPTFQ12830 3046 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
DDX55-209ENST00000542286 PAPOLAP51003 745 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 GEMIN4P57678 1058 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 IL9RQ01113 521 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 FAM187BQ17R55 369 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 LCLAT1Q6UWP7 414 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TEX9Q8N6V9 391 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PTPRN2Q92932 1015 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TSC22D3Q99576 134 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PAPOLBQ9NRJ5 636 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 ETNK2Q9NVF9 386 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PSMC3IPQ9P2W1 217 aaPredicted RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 PPME1Q9Y570 386 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 A8MXQ7 604 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SMIM24O75264 130 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 RECQL4O94761 1208 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 APRTP07741 180 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 F7P08709 466 aaPredicted RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 ACAT1P24752 427 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 HDAC4P56524 1084 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 INCA1Q0VD86 236 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 MTFR1Q15390 333 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SOWAHAQ2M3V2 549 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 GPR142Q7Z601 462 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TCP10LQ8TDR4 215 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SERAC1Q96JX3 654 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TTC25Q96NG3 672 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 NFKBIZQ9BYH8 718 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 WDR35Q9P2L0 1181 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SLC17A6Q9P2U8 582 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PRKAG3Q9UGI9 489 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 DCTN4Q9UJW0 460 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 MRPL42Q9Y6G3 142 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 TCRBV9S1A1TA0A576 114 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 CXorf49A8MYA2 514 aaPredicted RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 MAGEB2O15479 319 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TYROBPO43914 113 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 TOP3BO95985 862 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 RPS6KA3P51812 740 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SLC10A2Q12908 348 aaPredicted RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 NOMO1Q15155 1222 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 EFHC2Q5JST6 749 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PDIK1LQ8N165 341 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 RNF157Q96PX1 679 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 SYT17Q9BSW7 474 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 DHX35Q9H5Z1 703 aaKnown RBP15.36■□□□□ 0.05
DDX55-209ENST00000542286 USP29Q9HBJ7 922 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 PCDH18Q9HCL0 1135 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 ARL2BPQ9Y2Y0 163 aa15.36■□□□□ 0.05
DDX55-209ENST00000542286 CLDN5O00501 218 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 GNAT1P11488 350 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 P4HA1P13674 534 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 BEX3Q00994 111 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 RNASELQ05823 741 aaKnown RBP15.35■□□□□ 0.05
DDX55-209ENST00000542286 SOX4Q06945 474 aaPredicted RBP15.35■□□□□ 0.05
DDX55-209ENST00000542286 FAAP100Q0VG06 881 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 BMPR2Q13873 1038 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 HHATQ5VTY9 493 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 CTAGE3PQ8IX95 158 aa15.35■□□□□ 0.05
DDX55-209ENST00000542286 UNC5BQ8IZJ1 945 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms