RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SMIM22K7EJ46 135 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 AP3D1O14617 1153 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF213O14771 459 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 XPO1O14980 1071 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 MTSS1O43312 755 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 GREM1O60565 184 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 GPC4O75487 556 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ICAM1P05362 532 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 PGK2P07205 417 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 HDCP19113 662 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 SDSP20132 328 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CALB2P22676 271 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CST5P28325 142 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CIITAP33076 1130 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 DGKGP49619 791 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ADCY7P51828 1080 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 PMS1P54277 932 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 MPP1Q00013 466 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 XRCC4Q13426 336 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 LRRC26Q2I0M4 334 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 FAM76BQ5HYJ3 339 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 FAM47AQ5JRC9 791 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM164Q5U3C3 297 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 BTBD8Q5XKL5 378 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 TRIM65Q6PJ69 517 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 IGF2-ASQ6U949 168 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 SLC39A5Q6ZMH5 540 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 RFPL4BQ6ZWI9 263 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 KRT74Q7RTS7 529 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 KDELC2Q7Z4H8 507 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 FAM228AQ86W67 206 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 KRT73Q86Y46 540 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CNNM3Q8NE01 707 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 TRPV1Q8NER1 839 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 AGR3Q8TD06 166 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 GANCQ8TET4 914 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 KCTD13Q8WZ19 329 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 TTC9Q92623 222 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 GJA10Q969M2 543 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 LENG1Q96BZ8 264 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 GLT1D1Q96MS3 346 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ASB2Q96Q27 587 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 MLPHQ9BV36 600 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 OSBPL1AQ9BXW6 950 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 C6orf62Q9GZU0 229 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 TFB2MQ9H5Q4 396 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 RAVER2Q9HCJ3 691 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 SAMSN1Q9NSI8 373 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 RNF146Q9NTX7 359 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ASNSD1Q9NWL6 643 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 SENP1Q9P0U3 644 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 ADD3Q9UEY8 706 aaKnown RBP7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CACNG2Q9Y698 323 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 SESN1Q9Y6P5 492 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 WDR19Q8NEZ3 1342 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 A0A0J9YVX5 310 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SFI1A8K8P3 1242 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 VSTM5A8MXK1 200 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PRR5-ARHGAP8B1AHC4 643 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 FOXP2O15409 715 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SMAD6O43541 496 aaKnown RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CIDEAO60543 219 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CABYRO75952 493 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SNAPINO95295 136 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ZBED1O96006 694 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PRLP01236 227 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 FYNP06241 537 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF865P0CJ78 1059 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 RTP1P59025 263 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 EEF1A1P68104 462 aaKnown RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CHRNEQ04844 493 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 EEF1A2Q05639 463 aaKnown RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ASPHQ12797 758 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ACVR2BQ13705 512 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SLC9A5Q14940 896 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ACAP2Q15057 778 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ASIC2Q16515 512 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 TPD52L1Q16890 204 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 EEF1A1P5Q5VTE0 462 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 ARHGAP11AQ6P4F7 1023 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 C1orf228Q6PIY5 440 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 IDO2Q6ZQW0 420 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 TMC7Q7Z402 723 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PLA2G4DQ86XP0 818 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PASD1Q8IV76 773 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CCDC33Q8N5R6 958 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PIP4K2CQ8TBX8 421 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 MYCBPAPQ8TBZ2 947 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 FANK1Q8TC84 345 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 WASF1Q92558 559 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 GATA6Q92908 595 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PTPRN2Q92932 1015 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms