RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RPL17P18621 184 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZFP36P26651 326 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRPPRCP42704 1394 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 NPTX2P47972 431 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 MYOM2P54296 1465 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC8A3P57103 927 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 RAB1AP62820 205 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 MRPS35P82673 323 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 COL4A3Q01955 1670 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 G3BP1Q13283 466 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 TUBB3Q13509 450 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF267Q14586 743 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 POSTNQ15063 836 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 GEN1Q17RS7 908 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 KIAA0753Q2KHM9 967 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC92Q53HC0 331 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZC3H13Q5T200 1668 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC70Q6NSX1 233 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 Q6ZNX1 250 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 GPR149Q86SP6 731 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 TADA2BQ86TJ2 420 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 VRK3Q8IV63 474 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 MFN1Q8IWA4 741 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 LMNTD2Q8IXW0 634 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ABCA6Q8N139 1617 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ERMNQ8TAM6 284 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 POC1BQ8TC44 478 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 GPT2Q8TD30 523 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 NELL1Q92832 810 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 THOC1Q96FV9 657 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 MPP4Q96JB8 637 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 Q96MF0 132 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 SCLT1Q96NL6 688 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 OSBPL9Q96SU4 736 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ACO2Q99798 780 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 TMEM60Q9H2L4 133 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 RABEP2Q9H5N1 569 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 KCTD5Q9NXV2 234 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 SPATA7Q9P0W8 599 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 DKK3Q9UBP4 350 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 NRXN1Q9ULB1 1477 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 RIMS2Q9UQ26 1411 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 WDR37Q9Y2I8 494 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ATP6V0A2Q9Y487 856 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 PCSK5Q92824 1860 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 MROH1Q8NDA8 1641 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 PTPRMP28827 1452 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM135BQ49AJ0 1406 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 PABPN1LA6NDY0 278 aaKnown RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 M0QYG6 137 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 MTRF1O75570 445 aaKnown RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 KIAA0754O94854 1291 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF24P17028 368 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 TRIM21P19474 475 aaKnown RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 BDNFP23560 247 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 GCKP35557 465 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ACTN2P35609 894 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 FOLR3P41439 243 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 NDUFV1P49821 464 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 PTTG1IPP53801 180 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SEC24CP53992 1094 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 DDR1Q08345 913 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 TCF15Q12870 199 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC38Q502W7 563 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 PARP10Q53GL7 1025 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 STRIP1Q5VSL9 837 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 LMBRD2Q68DH5 695 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF783Q6ZMS7 281 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 CLEC17AQ6ZS10 378 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 GAS2L3Q86XJ1 694 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 DZIP1Q86YF9 867 aaKnown RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRRC49Q8IUZ0 686 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 APLFQ8IW19 511 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ADGRG5Q8IZF4 528 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC112Q8NEF3 446 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 OR6B3Q8NGW1 331 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ASB10Q8WXI3 467 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 LZICQ8WZA0 190 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SNX21Q969T3 373 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 NACC2Q96BF6 587 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SAAL1Q96ER3 474 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 RUFY1Q96T51 708 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 AGAP2Q99490 1192 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SH3GL1Q99961 368 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ALG8Q9BVK2 526 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZSCAN16Q9H4T2 348 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SYBUQ9NX95 663 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 CTTNBP2NLQ9P2B4 639 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC45A2Q9UMX9 530 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 RABL2BQ9UNT1 228 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SHOC2Q9UQ13 582 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 ITM2BQ9Y287 266 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 MED16Q9Y2X0 877 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 TMEM98Q9Y2Y6 226 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 DMRT1Q9Y5R6 373 aa5.09□□□□□ -1.59
HMGB3P13-201ENST00000511263 SCAF11Q99590 1463 aaKnown RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 ARHGAP23Q9P227 1491 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms