RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CHORDC1Q9UHD1 332 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-236ENST00000498808 FAM149AA5PLN7 773 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 CLDN5O00501 218 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 CACNG3O60359 315 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 GREM1O60565 184 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 CER1O95813 267 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 IRF1P10914 325 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 NCAM1P13591 858 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 MATKP42679 507 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 MMS19Q96T76 1030 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 FGFBP2Q9BYJ0 223 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 MIR1-1HGQ9H1L0 117 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 PCIF1Q9H4Z3 704 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 USP36Q9P275 1121 aaKnown RBP16.57■□□□□ 0.24
HDAC6-236ENST00000498808 SEL1LQ9UBV2 794 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 BTBD3Q9Y2F9 522 aa16.57■□□□□ 0.24
HDAC6-236ENST00000498808 R3HCC1Q9Y3T6 440 aaKnown RBP16.57■□□□□ 0.24
HDAC6-236ENST00000498808 GOLGA8CPA6NN73 597 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 GFRA2O00451 464 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 FLRT2O43155 660 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 RTN3O95197 1032 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-236ENST00000498808 GCNT3O95395 438 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 TYRP14679 529 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 PTPN1P18031 435 aaKnown RBP16.56■□□□□ 0.24
HDAC6-236ENST00000498808 GNL1P36915 607 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-236ENST00000498808 ABCG1P45844 678 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 HLA-BQ31612 363 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 METTL3Q86U44 580 aaKnown RBP16.56■□□□□ 0.24
HDAC6-236ENST00000498808 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 SCAMP5Q8TAC9 235 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 RHBDD1Q8TEB9 315 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 SCFD1Q8WVM8 642 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 SLC39A7Q92504 469 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 DNAJC19Q96DA6 116 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 CDC6Q99741 560 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 BBS2Q9BXC9 721 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 B3GNT5Q9BYG0 378 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 PCDHGB2Q9Y5G2 931 aa16.56■□□□□ 0.24
HDAC6-236ENST00000498808 KNTC1P50748 2209 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 BCAT2O15382 392 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-236ENST00000498808 TACC1O75410 805 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 TNNC2P02585 160 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 ZDHHC11BP0C7U3 371 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
HDAC6-236ENST00000498808 TUBP50607 506 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 FUT11Q495W5 492 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 DCAF12L1Q5VU92 463 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 IL27RAQ6UWB1 636 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 GPD1LQ8N335 351 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 CADM4Q8NFZ8 388 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 OR6B3Q8NGW1 331 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 C1orf216Q8TAB5 229 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 PIP4K2CQ8TBX8 421 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 DCBLD2Q96PD2 775 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 XPO6Q96QU8 1125 aaKnown RBP16.55■□□□□ 0.24
HDAC6-236ENST00000498808 KCNK16Q96T55 309 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 MKRN2Q9H000 416 aaKnown RBP16.55■□□□□ 0.24
HDAC6-236ENST00000498808 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 ITM2CQ9NQX7 267 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 IL37Q9NZH6 218 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 MARK1Q9P0L2 795 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 GMIPQ9P107 970 aa16.55■□□□□ 0.24
HDAC6-236ENST00000498808 PTPRQQ9UMZ3 2332 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 TMEM131Q92545 1883 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 MAST4O15021 2626 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 KALRNO60229 2985 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 METTL12A8MUP2 240 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 TK2O00142 265 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 CISD3P0C7P0 127 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 GAP43P17677 238 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 ITPKBP27987 946 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 PGFP49763 221 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 SLC5A3P53794 718 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 SMAD1Q15797 465 aaKnown RBP16.54■□□□□ 0.24
HDAC6-236ENST00000498808 DUOXA2Q1HG44 320 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 TPGS1Q6ZTW0 290 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 USP49Q70CQ1 688 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 HTR3DQ70Z44 454 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 CBWD2Q8IUF1 395 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 PDCD7Q8N8D1 485 aaKnown RBP16.54■□□□□ 0.24
HDAC6-236ENST00000498808 OLFML3Q9NRN5 406 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 EIF2B4Q9UI10 523 aaKnown RBP16.54■□□□□ 0.24
HDAC6-236ENST00000498808 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
HDAC6-236ENST00000498808 SLCO1B1Q9Y6L6 691 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 STON1Q9Y6Q2 735 aa16.54■□□□□ 0.24
HDAC6-236ENST00000498808 A0A1B0GVT2 93 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 FAM92AA1XBS5 289 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 CYSRT1A8MQ03 144 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 ATXN7O15265 892 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-236ENST00000498808 CST3P01034 146 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-236ENST00000498808 PLA2G2AP14555 144 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 DGKGP49619 791 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 TPMTP51580 245 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 PTPRNQ16849 979 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms