RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TTC41PQ6P2S7 1318 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 A0A1W2PPC4 97 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 LRRIQ4A6NIV6 560 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 PRSS44E7EML9 344 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 K7EM74 188 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 WNT9AO14904 365 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 IGHV4-34P06331 123 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 HGFP14210 728 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 LIG1P18858 919 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 FECHP22830 423 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 UGT1A5P35504 534 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 GNAQP50148 359 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 COPAP53621 1224 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 YARSP54577 528 aaKnown RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 NXPH1P58417 271 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 OSTNP61366 133 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 NMIQ13287 307 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 PRPF4BQ13523 1007 aaKnown RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 IMMTQ16891 758 aaKnown RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 SKOR2Q2VWA4 1001 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 DCAF4L1Q3SXM0 396 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 XKR9Q5GH70 373 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 CRTC1Q6UUV9 634 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 DSTYKQ6XUX3 929 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 TMPRSS9Q7Z410 1059 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 TMEM130Q8N3G9 435 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 SLC25A45Q8N413 288 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 FBXO39Q8N4B4 442 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 OXR1Q8N573 874 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 OR4C6Q8NH72 309 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 SLC5A5Q92911 643 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 APOLD1Q96LR9 279 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 CATSPER2Q96P56 530 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 TRIM9Q9C026 710 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 BTBD1Q9H0C5 482 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 SEMA6CQ9H3T2 930 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 TOPORSQ9NS56 1045 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 DNAJC17Q9NVM6 304 aaKnown RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 CFAP97Q9P2B7 532 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 WRAP73Q9P2S5 460 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-206ENST00000471968 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
HDAC3-206ENST00000471968 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-206ENST00000471968 PKD1L1Q8TDX9 2849 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 A0A1W2PR77 199 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 FAM47DPA6NHR8 397 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 TLR4O00206 839 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 HOXC11O43248 304 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-206ENST00000471968 PSMD10O75832 226 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 CNTN5O94779 1100 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 RXRAP19793 462 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 LEPRP48357 1165 aaKnown RBP7.07□□□□□ -1.28
HDAC3-206ENST00000471968 LTBQ06643 244 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 ALKAL1Q6UXT8 129 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 CEP120Q8N960 986 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 FSIP1Q8NA03 581 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 LHX5Q9H2C1 402 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 ERVMER34-1Q9H9K5 563 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 EBF2Q9HAK2 575 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 CYLDQ9NQC7 956 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 CPQQ9Y646 472 aa7.07□□□□□ -1.28
HDAC3-206ENST00000471968 SHANK1Q9Y566 2161 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 LY6G6EA0A0G2JKS1 128 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 HIP1O00291 1037 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 CASC3O15234 703 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 NVLO15381 856 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 EDN1P05305 212 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 SNRPB2P08579 225 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 YWHABP31946 246 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 CIITAP33076 1130 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PTGER4P35408 488 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 CLCN1P35523 988 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 ARL2P36404 184 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PDE6CP51160 858 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PDX1P52945 283 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 SEPT6Q14141 434 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 DDR2Q16832 855 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 XKR4Q5GH76 650 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 KIAA0895LQ68EN5 471 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PPP1R18Q6NYC8 613 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 ASB18Q6ZVZ8 466 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 RAB11FIP2Q7L804 512 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 SPATS2Q86XZ4 545 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 DTX1Q86Y01 620 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 TMEM25Q86YD3 366 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 TEX2Q8IWB9 1127 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 KIAA1958Q8N8K9 716 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 SPPL2BQ8TCT7 592 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 ZCWPW1Q9H0M4 648 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 SYNDIG1Q9H7V2 258 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 EPB41L5Q9HCM4 733 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PREBQ9HCU5 417 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 ANO2Q9NQ90 1003 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 UCKL1Q9NWZ5 548 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms