RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 MTMR3Q13615 1198 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ZNF449Q6P9G9 518 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ZNF662Q6ZS27 426 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 PPP2R3CQ969Q6 453 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 CFAP36Q96G28 342 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ZNF317Q96PQ6 595 aaPredicted RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 MAGEB5Q9BZ81 275 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 SLC7A5P2Q9GIP4 190 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 CDC42EP4Q9H3Q1 356 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 TRPV5Q9NQA5 729 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 UVRAGQ9P2Y5 699 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ZNF112Q9UJU3 913 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 SLC25A27O95847 323 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 GZMAP12544 262 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 OAZ1P54368 228 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 NOMO3P69849 1222 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 PDIA2Q13087 525 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 MREGQ8N565 214 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 RDM1Q8NG50 284 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 CFAP57Q96MR6 1250 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 RBM15Q96T37 977 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP11-206ENST00000469080 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 FAF1Q9UNN5 650 aaPredicted RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 ARL2P36404 184 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 GRIK4Q16099 956 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 PALM2Q8IXS6 379 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 ATXN7L3BQ96GX2 97 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 GBA2Q9HCG7 927 aaPredicted RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP11-206ENST00000469080 MAP3K20Q9NYL2 800 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 IKBKGQ9Y6K9 419 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 ASB14A6NK59 587 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 KIAA0391O15091 583 aaKnown RBP12.8□□□□□ -0.36
USP11-206ENST00000469080 SNX3O60493 162 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 MSCO60682 206 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 STX2P32856 288 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 GAD2Q05329 585 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 CLPPQ16740 277 aaPredicted RBP12.8□□□□□ -0.36
USP11-206ENST00000469080 TREML1Q86YW5 311 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 LPPQ93052 612 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 ZFP42Q96MM3 310 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 CPXM1Q96SM3 734 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 DPP3Q9NY33 737 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 NUDT5Q9UKK9 219 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
USP11-206ENST00000469080 CAPN9O14815 690 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 WFS1O76024 890 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 STBD1O95210 358 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 LYNP07948 512 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 CCDC130P13994 396 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 GM2AP17900 193 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 RFX1P22670 979 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 HADHQ16836 314 aaKnown RBP12.8□□□□□ -0.36
USP11-206ENST00000469080 PTPN20Q4JDL3 420 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 FAM13CQ8NE31 585 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 CCT7Q99832 543 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 NMRK2Q9NPI5 230 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 KNL1Q8NG31 2342 aa12.8□□□□□ -0.36
USP11-206ENST00000469080 E5RJQ4 531 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 PRPSAP2O60256 369 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 PROSCO94903 275 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 GEMIN4P57678 1058 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 GCNT1Q02742 428 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 KRT72Q14CN4 511 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 FASTKD3Q14CZ7 662 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 SLC7A5P1Q8MH63 180 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 AZIN2Q96A70 460 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 PIWIL1Q96J94 861 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 STRA6Q9BX79 667 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 RBMX2Q9Y388 322 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 PCDHA3Q9Y5H8 950 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 A0A0A6YYK5 440 aaPredicted RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 TRIM64CA6NLI5 447 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms