RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SLC12A8A0AV02 714 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 PGK1P00558 417 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 KPNA1P52294 538 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 LRRC52Q8N7C0 313 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 BSNDQ8WZ55 320 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 LENG9Q96B70 501 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 PAFAH2Q99487 392 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CINPQ9BW66 212 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 HSD3B7Q9H2F3 369 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 L3MBTL1Q9Y468 752 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 RIPK2O43353 540 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 B4GALT4O60513 344 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 SERPINB4P48594 390 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
BRAT1-203ENST00000467558 CDH18Q13634 790 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 GIPC2Q8TF65 315 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 RNPEPQ9H4A4 650 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 POPDC2Q9HBU9 364 aa14.26□□□□□ -0.13
BRAT1-203ENST00000467558 TIMM44O43615 452 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 NOL4O94818 638 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 CALCAP01258 141 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 FAM153BP0C7A2 387 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 PTPN1P18031 435 aaKnown RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 KDELR1P24390 212 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ZNF135P52742 658 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 RRP1BQ14684 758 aaKnown RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 FAM153CQ494X1 144 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 DDIASQ8IXT1 998 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 COLGALT1Q8NBJ5 622 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 SEMA4DQ92854 862 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ERP27Q96DN0 273 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 KREMEN1Q96MU8 473 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 PDGFDQ9GZP0 370 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 BRD8Q9H0E9 1235 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 TMEM51Q9NW97 253 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 FAM153AQ9UHL3 310 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 H0Y626 953 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ARL2P36404 184 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 AMPD2Q01433 879 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 MYCBPAPQ8TBZ2 947 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 USP13Q92995 863 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 SPDL1Q96EA4 605 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 MRPL9Q9BYD2 267 aaKnown RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 MRGBPQ9NV56 204 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 A0A0G2JLL6 359 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 LTFP02788 710 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 APOA4P06727 396 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ZBTB48P10074 688 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 CCDC130P13994 396 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 PECAM1P16284 738 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 PRRT2Q7Z6L0 340 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 FAM111AQ96PZ2 611 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 GMLQ99445 158 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 CDY1Q9Y6F8 540 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 CCT8L1PA6NM43 557 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 NOS2P35228 1153 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 SCNN1GP51170 649 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ZNF143P52747 638 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 SP3Q02447 781 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 NOGQ13253 232 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 NTPCRQ9BSD7 190 aaKnown RBP14.25□□□□□ -0.13
BRAT1-203ENST00000467558 CYP4F11Q9HBI6 524 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
BRAT1-203ENST00000467558 ALS2Q96Q42 1657 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 GLRA3O75311 464 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 CNTFP26441 200 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 MLH1P40692 756 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 YAF2Q8IY57 180 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 LRRC34Q8IZ02 419 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 LZTR1Q8N653 840 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 HTR3CQ8WXA8 447 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 DMAC2Q9NW81 257 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 PCYOX1Q9UHG3 505 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 STX7O15400 261 aaKnown RBP14.24□□□□□ -0.13
BRAT1-203ENST00000467558 CKMP06732 381 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ALDH18A1P54886 795 aaKnown RBP14.24□□□□□ -0.13
BRAT1-203ENST00000467558 SH3BGRP55822 239 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-203ENST00000467558 FAM83EQ2M2I3 478 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 SPDYCQ5MJ68 293 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 WSCD1Q658N2 575 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 TSHZ1Q6ZSZ6 1077 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 SERPINB11Q96P15 392 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 TTYH3Q9C0H2 523 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 WDR70Q9NW82 654 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ORC6Q9Y5N6 252 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms