RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TLE6Q9H808 572 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 RPF1Q9H9Y2 349 aaKnown RBP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KIAA1586Q9HCI6 787 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 EXOC1Q9NV70 894 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TBC1D7Q9P0N9 293 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 FNIP2Q9P278 1114 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 AGO2Q9UKV8 859 aaKnown RBP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 UBQLN1Q9UMX0 589 aaKnown RBP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 FAM50BQ9Y247 325 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 HIF3AQ9Y2N7 669 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRG3Q9Y2Y8 225 aaPredicted RBP5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PCDHGC5Q9Y5F6 944 aa5□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TDRD15B5MCY1 1934 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TCHHQ07283 1943 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CITO14578 2027 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MYO7AQ13402 2215 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 BRWD1Q9NSI6 2320 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 BLACEA4D250 179 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CASTOR2A6NHX0 329 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 HIDE1A8MVS5 230 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 LACTBL1A8MY62 500 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TISP43B9A030 160 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 F8W810 466 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PODXLO00592 558 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SYN3O14994 580 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TRAPPC3O43617 180 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PCDHGA12O60330 932 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CLASP2O75122 1294 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TBX10O75333 385 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TADA2AO75478 443 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 B3GAT3O94766 335 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KIF20AO95235 890 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CXCL14O95715 111 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 IL33O95760 270 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 GLP2RO95838 553 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 RPN1P04843 607 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 POU2F2P09086 479 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CNPP09543 421 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SRGAP2BP0DMP2 458 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 HARSP12081 509 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CD33P20138 364 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 EPHA1P21709 976 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 FGFR3P22607 806 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MAOBP27338 520 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CASP1P29466 404 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TNFSF9P41273 254 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MATR3P43243 847 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 NRIP1P48552 1158 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 RENBPP51606 427 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MECP2P51608 486 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CLCNKBP51801 687 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KPNA1P52294 538 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 OSTNP61366 133 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRR20EP86478 221 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRR20CP86479 221 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRR20DP86480 221 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRR20BP86481 221 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PRR20AP86496 221 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 BTKQ06187 659 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SOX4Q06945 474 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 ENPEPQ07075 957 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SMAD4Q13485 552 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MYBPC2Q14324 1141 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SURF1Q15526 300 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 ELF2Q15723 593 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 NFIL3Q16649 462 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KNOP1Q1ED39 458 aaKnown RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SKOR2Q2VWA4 1001 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 GLRA4Q5JXX5 417 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 ZBTB41Q5SVQ8 909 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SPATA1Q5VX52 437 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 ARMCX5Q6P1M9 558 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 MZT2AQ6P582 158 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 PGM2L1Q6PCE3 622 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CD300LGQ6UXG3 332 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CRELD2Q6UXH1 353 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 C12orf40Q86WS4 652 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 GRAMD1CQ8IYS0 662 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SYCP3Q8IZU3 236 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 GPD1LQ8N335 351 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 TMEM145Q8NBT3 493 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KCT2Q8NC54 265 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SMRP1Q8NCR6 262 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CLRN3Q8NCR9 226 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 KIAA0895Q8NCT3 520 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 BEST2Q8NFU1 509 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CMASQ8NFW8 434 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 VN1R2Q8NFZ6 395 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SPATA20Q8TB22 786 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SLC22A17Q8WUG5 538 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 HDAC7Q8WUI4 952 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 CYB5D2Q8WUJ1 264 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 BTN2A2Q8WVV5 523 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 SUSD6Q92537 303 aa4.99□□□□□ -1.61
RNU6ATAC28P-201ENST00000459249 HPS3Q969F9 1004 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms