RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 KRT20P35900 424 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 MCM2P49736 904 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 PMS2P54278 862 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ALDH18A1P54886 795 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 RRP1P56182 461 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 DSTNP60981 165 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SLC6A3Q01959 620 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CUL3Q13618 768 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 GTF2H3Q13889 308 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ANKDD1AQ495B1 522 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CFAP221Q4G0U5 840 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SETMARQ53H47 684 aaPredicted RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CEP78Q5JTW2 689 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CEP85LQ5SZL2 805 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ESRP1Q6NXG1 681 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 C11orf88Q6PI97 169 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SLC30A9Q6PML9 568 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 C4orf50Q6ZRC1 276 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 HTR3DQ70Z44 454 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 GRASPQ7Z6J2 395 aaPredicted RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 RTN4RL1Q86UN2 441 aaPredicted RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 HOOK3Q86VS8 718 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CMTR2Q8IYT2 770 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 TBC1D21Q8IYX1 336 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SYT2Q8N9I0 419 aaPredicted RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 NAXEQ8NCW5 288 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 GDAP1Q8TB36 358 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 MGARPQ8TDB4 240 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 NOC3LQ8WTT2 800 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 GTF3C6Q969F1 213 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 GIMAP5Q96F15 307 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 RBM41Q96IZ5 413 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 CATSPER2Q96P56 530 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 PSKH2Q96QS6 385 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 NUP88Q99567 741 aaPredicted RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 TSG101Q99816 390 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CCT7Q99832 543 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 C7orf25Q9BPX7 421 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 DESI2Q9BSY9 194 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 CENPOQ9BU64 300 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SARGQ9BW04 601 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 EDEM3Q9BZQ6 932 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 KCTD10Q9H3F6 313 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 DNAJC18Q9H819 358 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ACAD9Q9H845 621 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 PSTPIP2Q9H939 334 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 RSAD1Q9HA92 442 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ZCCHC17Q9NP64 241 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 ACSS2Q9NR19 701 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.28□□□□□ -1.72
KRR1-202ENST00000438169 SAGE1Q9NXZ1 904 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 TUBGCP4Q9UGJ1 667 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 HOOK1Q9UJC3 728 aaKnown RBP4.28□□□□□ -1.72
KRR1-202ENST00000438169 SH3BGRL2Q9UJC5 107 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 ZBTB21Q9ULJ3 1066 aa4.28□□□□□ -1.72
KRR1-202ENST00000438169 MAP3K19Q56UN5 1328 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 DNAJC9-AS1A6NH13 148 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 CCDC69A6NI79 296 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 OR6C65A6NJZ3 312 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 TRIM75PA6NK02 468 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 J3KRW8 73 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 APOL1O14791 398 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 CHUKO15111 745 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 WDR46O15213 610 aaKnown RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 NVLO15381 856 aaKnown RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 TEX28O15482 410 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 STX6O43752 255 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 KCNJ13O60928 360 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 RPS6KA5O75582 802 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 TMCC1O94876 653 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 SLITRK3O94933 977 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 INMTO95050 263 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 APOL3O95236 402 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 PENKP01210 267 aaPredicted RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 CCDC166P0CW27 439 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 THEGLP0DJG4 465 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 TOP1P11387 765 aaKnown RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 CKBP12277 381 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 LPOP22079 712 aaPredicted RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 HOXD12P35452 270 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 CHKAP35790 457 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 TRIM23P36406 574 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 ABCG1P45844 678 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 PTTG1IPP53801 180 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 B2MP61769 119 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 LRRC32Q14392 662 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 GBX1Q14549 363 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 SPCS2Q15005 226 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 ELAVL1Q15717 326 aaKnown RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 SUPT20HL1Q3ZLR7 823 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 ODF2Q5BJF6 829 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 CFAP157Q5JU67 520 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 FKBP15Q5T1M5 1219 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 KANK2Q63ZY3 851 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 OTUD7BQ6GQQ9 843 aa4.27□□□□□ -1.73
KRR1-202ENST00000438169 TWF2Q6IBS0 349 aaKnown RBP4.27□□□□□ -1.73
KRR1-202ENST00000438169 NCAPH2Q6IBW4 605 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms