RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 MAEAQ7L5Y9 396 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CATSPER4Q7RTX7 472 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 OVCH1Q7RTY7 1134 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TRMT1LQ7Z2T5 733 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 KDELC2Q7Z4H8 507 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 NEK8Q86SG6 692 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ANKRD13BQ86YJ7 626 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CCDC60Q8IWA6 550 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PRR18Q8N4B5 295 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ARHGEF39Q8N4T4 335 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 BEND7Q8N7W2 519 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 GIMAP7Q8NHV1 300 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 HIC2Q96JB3 615 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SLC2A13Q96QE2 648 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PCYT2Q99447 389 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ZNF577Q9BSK1 485 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 C16orf70Q9BSU1 422 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 MKRN2Q9H000 416 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ADAM19Q9H013 955 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 NOL6Q9H6R4 1146 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CNTD2Q9H8S5 307 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ZWILCHQ9H900 591 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 BATF3Q9NR55 127 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ABCF3Q9NUQ8 709 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 HDAC6Q9UBN7 1215 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TBC1D29Q9UFV1 150 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 DDX25Q9UHL0 483 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TUBD1Q9UJT1 453 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TBX21Q9UL17 535 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SOX13Q9UN79 622 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 NR2E3Q9Y5X4 410 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SCN10AQ9Y5Y9 1956 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 LAMA3Q16787 3333 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 LTBP2Q14767 1821 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 NFASCO94856 1347 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 A0A1B0GUA9 196 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 VPS37CA5D8V6 355 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 TMEM150BA6NC51 233 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 H7C0S8 307 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HAS3O00219 553 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ACKR2O00590 384 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 APOL1O14791 398 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 KDM1AO60341 852 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 DOK2O60496 412 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 NEMFO60524 1076 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CABYRO75952 493 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 KRT37O76014 449 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ADCY5O95622 1261 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 EOMESO95936 686 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 THP07101 528 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SUPT20HL2P0C7V6 817 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SMIM10L2AP0DMW4 78 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SMIM10L2BP0DMW5 78 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HPDP32754 393 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CYP2C18P33260 490 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 MCM7P33993 719 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 RDXP35241 583 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 TRPC1P48995 793 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 DNM2P50570 870 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 PAPOLAP51003 745 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CCNHP51946 323 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ETF1P62495 437 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 PHC1P78364 1004 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SMAD2Q15796 467 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ASIC2Q16515 512 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 UGCGQ16739 394 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HHATQ5VTY9 493 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CEP135Q66GS9 1140 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HAUS3Q68CZ6 603 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 GDF6Q6KF10 455 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HFE2Q6ZVN8 426 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 NIPA1Q7RTP0 329 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ANKRD33Q7Z3H0 272 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 NOSTRINQ8IVI9 506 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CISD2Q8N5K1 135 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 RNF214Q8ND24 703 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ZMIZ2Q8NF64 920 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 ETNPPLQ8TBG4 499 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 C17orf50Q8WW18 174 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SEPT1Q8WYJ6 367 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HTRA1Q92743 480 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 HAS1Q92839 578 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 GLG1Q92896 1179 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 BADQ92934 168 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 WNT8BQ93098 351 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 THOC1Q96FV9 657 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 APIPQ96GX9 242 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 MAELQ96JY0 434 aaKnown RBP4.84□□□□□ -1.63
SF3B1-202ENST00000409915 SPATA17Q96L03 361 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 RMDN2Q96LZ7 410 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 MBOAT7Q96N66 472 aa4.84□□□□□ -1.63
SF3B1-202ENST00000409915 CTAGE1Q96RT6 745 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms