RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HAUS5O94927 633 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 P4HA1P13674 534 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 EPHX2P34913 555 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 RIPK1Q13546 671 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 KBTBD12Q3ZCT8 623 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 SLC25A41Q8N5S1 370 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 UTP4Q969X6 686 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 SGF29Q96ES7 293 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 TMEM176AQ96HP8 235 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 LGMNQ99538 433 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 TSSK1BQ9BXA7 367 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 PCDH9Q9HC56 1237 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 STARD13Q9Y3M8 1113 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 GYG2O15488 501 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 MED7O43513 233 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 STBD1O95210 358 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CXCR3P49682 368 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 RASSF2P50749 326 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 ARFIP2P53365 341 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 PTP4A2Q12974 167 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 PID1Q7Z2X4 250 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 ERO1BQ86YB8 467 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 SLC2A14Q8TDB8 520 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CPT1BQ92523 772 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 EXT2Q93063 718 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 MANSC1Q9H8J5 431 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 TMEM63AO94886 807 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CELF2O95319 508 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 SERPINB3P29508 390 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 ALDH18A1P54886 795 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 FAAP100Q0VG06 881 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 PMF1Q6P1K2 205 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 NT5C1AQ9BXI3 368 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 ZC3H7BQ9UGR2 993 aaKnown RBP13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CLUHO75153 1309 aa13.9□□□□□ -0.19
COL6A2-204ENST00000409416 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SPTLC1O15269 473 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ALOX15BO15296 676 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 POMCP01189 267 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 NDUFV1P49821 464 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 GBE1Q04446 702 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 EBF2Q9HAK2 575 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SHOC2Q9UQ13 582 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 KIAA0100Q14667 2235 aaKnown RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 MAFO75444 373 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 MT-CO1P00395 513 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 PGK1P00558 417 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ARL2P36404 184 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 MAP3K7CLP57077 242 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SDHAF4Q5VUM1 108 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 AGGF1Q8N302 714 aaeCLIP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 STMN2Q93045 179 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 OSBPL1AQ9BXW6 950 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ASNSD1Q9NWL6 643 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 MAFBQ9Y5Q3 323 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ACKR2O00590 384 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 NEMP1O14524 444 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 HBP1O60381 514 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 TCEA3O75764 348 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ABHD2P08910 425 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ESRRAP11474 423 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 EPHB1P54762 984 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SEPT6Q14141 434 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 NXNQ6DKJ4 435 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 DSTYKQ6XUX3 929 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 WDR49Q8IV35 697 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 SPATA6LQ8N4H0 392 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 MCUQ8NE86 351 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 PGBD4Q96DM1 585 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.89□□□□□ -0.19
COL6A2-204ENST00000409416 ACTL7BQ9Y614 415 aa13.89□□□□□ -0.19
COL6A2-204ENST00000409416 EME2A4GXA9 379 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 COPEO14579 308 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 KRT7P08729 469 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 GPD1P21695 349 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 CRYMQ14894 314 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms