RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 HEATR6Q6AI08 1181 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 DNAAF3Q8N9W5 541 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 PPEF2O14830 753 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 ZMPSTE24O75844 475 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CYP2C8P10632 490 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CCDC130P13994 396 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 SMIM24O75264 130 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 OLIG2Q13516 323 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 DCAKDQ8WVC6 231 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC7A6OSQ96CW6 309 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 LGMNQ99538 433 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 KCNK1O00180 336 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ATP9BO43861 1147 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 KRT38O76015 456 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ZCCHC18P0CG32 403 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 MOGSQ13724 837 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 UBAP2LQ14157 1087 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 GPR20Q99678 358 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 NIFKQ9BYG3 293 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 LRMDAQ9H2I8 198 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 WDR35Q9P2L0 1181 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 NUMBLQ9Y6R0 609 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 CENPFP49454 3210 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PEX11AO75192 247 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 CYP2F1P24903 491 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 STIP1P31948 543 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PEX6Q13608 980 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 DNERQ8NFT8 737 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 WDR83Q9BRX9 315 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 UBP1Q9NZI7 540 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PAK5Q9P286 719 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ITGBL1O95965 494 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF132P52740 706 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 POLE2P56282 527 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 CLDN10P78369 228 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ZRSR2Q15696 482 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 DCAF6Q58WW2 860 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 IL31Q6EBC2 164 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PLD5Q8N7P1 536 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 CXCL16Q9H2A7 254 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
PPP4R1-202ENST00000400555 LY75O60449 1722 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 ACAT1P24752 427 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 MLH1P40692 756 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 STX3Q13277 289 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 CRYMQ14894 314 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 TEX9Q8N6V9 391 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 C18orf25Q96B23 403 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 BTBD10Q9BSF8 475 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 TXNRD2Q9NNW7 524 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 C2CD2LO14523 706 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 METTL18O95568 372 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 SERPINB6P35237 376 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 OAZ1P54368 228 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 RBP5P82980 135 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 PID1Q7Z2X4 250 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms