RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GRIA2P42262 883 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 PXNP49023 591 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 PGFP49763 221 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 BCAT1P54687 386 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 STX17P56962 302 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 MRPS21P82921 87 aaKnown RBP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 DMC1Q14565 340 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 CAMK4Q16566 473 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 GOLGA7BQ2TAP0 167 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 HTR3DQ70Z44 454 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 PIGZQ86VD9 579 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 BBS7Q8IWZ6 715 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 PPM1KQ8N3J5 372 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 HHIPQ96QV1 700 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 KLF16Q9BXK1 252 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 NMUR1Q9HB89 426 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 SPHK2Q9NRA0 654 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 KIAA1468Q9P260 1216 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 DEC1Q9P2X7 70 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.46□□□□□ -0.09
CXCL12-205ENST00000395794 USP3Q9Y6I4 520 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 ANAPC1Q9H1A4 1944 aa14.46□□□□□ -0.09
CXCL12-205ENST00000395794 K7EQS6 105 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 AXIN1O15169 862 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 HOXC11O43248 304 aaPredicted RBP14.45□□□□□ -0.1
CXCL12-205ENST00000395794 VDRP11473 427 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 SDHBP21912 280 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 SLC6A11P48066 632 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 COG7P83436 770 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 KDSRQ06136 332 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 SRSF5Q13243 272 aaKnown RBP14.45□□□□□ -0.1
CXCL12-205ENST00000395794 TMEM270Q6UE05 265 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 MIB1Q86YT6 1006 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 CREBRFQ8IUR6 639 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 ZNF276Q8N554 614 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 NAT16Q8N8M0 369 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 TSTD1Q8NFU3 115 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 USP33Q8TEY7 942 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 GAB3Q8WWW8 586 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 EZH1Q92800 747 aaPredicted RBP14.45□□□□□ -0.1
CXCL12-205ENST00000395794 IPO9Q96P70 1041 aaKnown RBP14.45□□□□□ -0.1
CXCL12-205ENST00000395794 SRRTQ9BXP5 876 aaKnown RBP14.45□□□□□ -0.1
CXCL12-205ENST00000395794 LRRC4Q9HBW1 653 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 OSER1Q9NX31 292 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 WDR35Q9P2L0 1181 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 NUDT5Q9UKK9 219 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 TSPAN16Q9UKR8 245 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 STRIP2Q9ULQ0 834 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 PCDHB4Q9Y5E5 795 aa14.45□□□□□ -0.1
CXCL12-205ENST00000395794 CFAP54Q96N23 3096 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 TBC1D3BA6NDS4 549 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 XPO1O14980 1071 aaKnown RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 ALDH1A2O94788 518 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 ZBED1O96006 694 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 AFPP02771 609 aaKnown RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 PAEPP09466 180 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 TNFRSF4P43489 277 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 TKTL1P51854 596 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 LMNB2Q03252 620 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 BST2Q10589 180 aaKnown RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 KCNH2Q12809 1159 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 GAB4Q2WGN9 574 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 HSF5Q4G112 596 aaPredicted RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 TMEM25Q86YD3 366 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 SIX6OS1Q8N1H7 587 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 DCLK3Q9C098 648 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 RWDD2AQ9UIY3 292 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 RASAL2Q9UJF2 1139 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 ZNF510Q9Y2H8 683 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 PTPRZ1P23471 2315 aaPredicted RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 HELZP42694 1942 aaKnown RBP14.44□□□□□ -0.1
CXCL12-205ENST00000395794 FANCMQ8IYD8 2048 aa14.44□□□□□ -0.1
CXCL12-205ENST00000395794 RIF1Q5UIP0 2472 aaKnown RBP14.43□□□□□ -0.1
CXCL12-205ENST00000395794 WDR87Q6ZQQ6 2873 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 PRR5-ARHGAP8B1AHC4 643 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 MDM4O15151 490 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 LRP3O75074 770 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 SETSIPP0DME0 302 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 TIE1P35590 1138 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 DGKEP52429 567 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 ARHGAP8P85298 464 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 PDE4CQ08493 712 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 SPEM2Q0P670 501 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 EFEMP1Q12805 493 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 STILQ15468 1287 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 RAB41Q5JT25 222 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 EOGTQ5NDL2 527 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 TRMT11Q7Z4G4 463 aaKnown RBP14.43□□□□□ -0.1
CXCL12-205ENST00000395794 TTC30AQ86WT1 665 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 TRIM59Q8IWR1 403 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 CCDC33Q8N5R6 958 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 FAM160A2Q8N612 972 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-205ENST00000395794 EHBP1Q8NDI1 1231 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms