RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TTC30AQ86WT1 665 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 C4orf33Q8N1A6 199 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 BANPQ8N9N5 519 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 KLHL29Q96CT2 875 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 MS4A4AQ96JQ5 239 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 TNIP3Q96KP6 325 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 PPP1R16BQ96T49 567 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 MRPL45Q9BRJ2 306 aaKnown RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 SNX25Q9H3E2 840 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 RAB6BQ9NRW1 208 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 SNTG2Q9NY99 539 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 PIRO00625 290 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 KCNN4O15554 427 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 GPR32O75388 356 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 KRT37O76014 449 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 IL4RP24394 825 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 GTF2A1P52655 376 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 CDK16Q00536 496 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 MMRN1Q13201 1228 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 SV2CQ496J9 727 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 FBXO47Q5MNV8 452 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 TRNP1Q6NT89 227 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 LVRNQ6Q4G3 990 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 CAPN12Q6ZSI9 719 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 CYS1Q717R9 158 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 SLC26A11Q86WA9 606 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 CHSY1Q86X52 802 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 MZB1Q8WU39 189 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 ZNF75CPQ92670 426 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 MTBPQ96DY7 904 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 SNRNP25Q9BV90 132 aaKnown RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 NRDE2Q9H7Z3 1164 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 XAB2Q9HCS7 855 aaKnown RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 ARHGEF3Q9NR81 526 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 FOXO6A8MYZ6 492 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 PAPSS1O43252 624 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 IL1BP01584 269 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 GNL1P36915 607 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 RGS7P49802 495 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 YWHAGP61981 247 aaKnown RBP eCLIP18.78■□□□□ 0.6
CD40-201ENST00000372276 ATP11AP98196 1134 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 SLC18A2Q05940 514 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 CDO1Q16878 200 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 KIZQ2M2Z5 673 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 SLC45A4Q5BKX6 768 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 XKR4Q5GH76 650 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 TTC39BQ5VTQ0 682 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 C1orf228Q6PIY5 440 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 VPS52Q8N1B4 723 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 NME8Q8N427 588 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 FITM2Q8N6M3 262 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 PQLC3Q8N755 202 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 C12orf29Q8N999 325 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 PCDH19Q8TAB3 1148 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 KHSRPQ92945 711 aaKnown RBP eCLIP18.78■□□□□ 0.6
CD40-201ENST00000372276 LRRC37BQ96QE4 947 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 C11orf84Q9BUA3 381 aaPredicted RBP18.78■□□□□ 0.6
CD40-201ENST00000372276 ETNK2Q9NVF9 386 aa18.78■□□□□ 0.6
CD40-201ENST00000372276 ZNF236Q9UL36 1845 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 A0A1W2PPM1 405 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 F2P00734 622 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 TAF6P49848 677 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 DNAJC3Q13217 504 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 PTK7Q13308 1070 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 SLC1A5Q15758 541 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 CGB2Q6NT52 195 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 LIMS2Q7Z4I7 341 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 ECHDC2Q86YB7 292 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 SETD4Q9NVD3 440 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.77■□□□□ 0.6
CD40-201ENST00000372276 CHMP2BQ9UQN3 213 aa18.77■□□□□ 0.6
CD40-201ENST00000372276 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.76■□□□□ 0.59
CD40-201ENST00000372276 TCRBV7S3A2A0A539 114 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 TCRBV9S1A1TA0A576 114 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 KPNA7A9QM74 516 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
CD40-201ENST00000372276 UNC5CO95185 931 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 TGDSO95455 350 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 CYP2C9P11712 490 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 EZRP15311 586 aaKnown RBP18.76■□□□□ 0.59
CD40-201ENST00000372276 PRKCHP24723 683 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 CYP2F1P24903 491 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 FDFT1P37268 417 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 SERPINB9P50453 376 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 HDAC4P56524 1084 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 ADCY1Q08828 1119 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 SH3PXD2AQ5TCZ1 1133 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 NPNTQ6UXI9 565 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 ASRGL1Q7L266 308 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 LRRC6Q86X45 466 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 CCNJLQ8IV13 435 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 SCUBE3Q8IX30 993 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 TOP6BLQ8N6T0 577 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 APPL2Q8NEU8 664 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 INPP5DQ92835 1189 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 APOPT1Q96IL0 206 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms