RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 H2AFZP0C0S5 128 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 CSH1P0DML2 217 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 CSH2P0DML3 217 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 GABRR2P28476 465 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 ATICP31939 592 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 PSMC2P35998 433 aaKnown RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 GGCXP38435 758 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 CCR2P41597 374 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 STAT1P42224 750 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 MAGEA9P43362 315 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 ID4P47928 161 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 KLK7P49862 253 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TEAD2Q15562 447 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 SLC44A4Q53GD3 710 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 H2AFVQ71UI9 128 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 SRLQ86TD4 932 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TMC8Q8IU68 726 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 SPATA2LQ8IUW3 424 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 YAF2Q8IY57 180 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 MAML2Q8IZL2 1156 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 CXorf38Q8TB03 319 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 ZSCAN18Q8TBC5 510 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 IRF7Q92985 503 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TCEAL4Q96EI5 215 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 RUNDC3BQ96NL0 473 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TRMT61BQ9BVS5 477 aaKnown RBP10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TLR10Q9BXR5 811 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 OSBPL6Q9BZF3 934 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 BRD9Q9H8M2 597 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 TRPV4Q9HBA0 871 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 CDH9Q9ULB4 789 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 FRMD4BQ9Y2L6 1034 aa10.94□□□□□ -0.66
COL5A1-202ENST00000371820 COL4A2P08572 1712 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 PTPRJQ12913 1337 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 A0A087WUV0 522 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 DPYSL4O14531 572 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 NCAM2O15394 837 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 NR3C1P04150 777 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 PSMC3P17980 439 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 WARSP23381 471 aaKnown RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 NR2F2P24468 414 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 DDX6P26196 483 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 USP8P40818 1118 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 C2orf54Q08AI8 447 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 BIRC3Q13489 604 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 RAPGEF1Q13905 1077 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 UBXN2BQ14CS0 331 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 SOWAHAQ2M3V2 549 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 FAM78AQ5JUQ0 283 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 TANGO2Q6ICL3 276 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 C1orf228Q6PIY5 440 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 POTEHQ6S545 545 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 TTC9BQ8N6N2 239 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 SHKBP1Q8TBC3 707 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 MSANTD3Q96H12 275 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 NELL2Q99435 816 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 SYT15Q9BQS2 421 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 PI4K2AQ9BTU6 479 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 LRRC3Q9BY71 257 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 BCO2Q9BYV7 579 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 ISCUQ9H1K1 167 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 LTB4R2Q9NPC1 389 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 NLRC4Q9NPP4 1024 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 TRPV5Q9NQA5 729 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 FAM114A2Q9NRY5 505 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 OBP2AQ9NY56 170 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 EHD2Q9NZN4 543 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 TTC7AQ9ULT0 858 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 MRPS17Q9Y2R5 130 aaKnown RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 RRP15Q9Y3B9 282 aaKnown RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-202ENST00000371820 DUSP10Q9Y6W6 482 aa10.93□□□□□ -0.66
COL5A1-202ENST00000371820 WDR87Q6ZQQ6 2873 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ATXN2Q99700 1313 aaKnown RBP10.92□□□□□ -0.66
COL5A1-202ENST00000371820 MYO1CO00159 1063 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 PDE2AO00408 941 aaPredicted RBP10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF185O15231 689 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 MAPK13O15264 365 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 P4HA2O15460 535 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 MOSPD3O75425 235 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 PALMO75781 387 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 NOL4O94818 638 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 P4HA1P13674 534 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 GJA1P17302 382 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ATF6P18850 670 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 FCARP24071 287 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
COL5A1-202ENST00000371820 MAGEA11P43364 429 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF528Q3MIS6 628 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 WDR72Q3MJ13 1102 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 GPR158Q5T848 1215 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 ALKBH5Q6P6C2 394 aaKnown RBP10.92□□□□□ -0.66
COL5A1-202ENST00000371820 LRRC31Q6UY01 552 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 TPRG1Q6ZUI0 275 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 764.2 ms