RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TATDN2Q93075 761 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 SLC35C1Q96A29 364 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 CEP63Q96MT8 703 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 HHIPQ96QV1 700 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 CDK5RAP1Q96SZ6 601 aaKnown RBP18.7■□□□□ 0.58
HDDC3-201ENST00000330334 POLR3BQ9NW08 1133 aaPredicted RBP18.7■□□□□ 0.58
HDDC3-201ENST00000330334 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 ATG2BQ96BY7 2078 aa18.7■□□□□ 0.58
HDDC3-201ENST00000330334 SCAMP3O14828 347 aaKnown RBP18.69■□□□□ 0.58
HDDC3-201ENST00000330334 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 DGKEP52429 567 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 CRY1Q16526 586 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 ZNF394Q53GI3 561 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 C2orf27AQ580R0 203 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 DCAF17Q5H9S7 520 aaPredicted RBP18.69■□□□□ 0.58
HDDC3-201ENST00000330334 NUDT18Q6ZVK8 323 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 RASSF3Q86WH2 238 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 C12orf40Q86WS4 652 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 ANKRD52Q8NB46 1076 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 ERCC4Q92889 916 aaPredicted RBP18.69■□□□□ 0.58
HDDC3-201ENST00000330334 NMUR1Q9HB89 426 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 ARHGEF4Q9NR80 690 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 PCDHGA5Q9Y5G8 931 aa18.69■□□□□ 0.58
HDDC3-201ENST00000330334 A0A1W2PQH9 124 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 RARGP13631 454 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 KIR2DL1P43626 348 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-201ENST00000330334 SLC8A3P57103 927 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
HDDC3-201ENST00000330334 MESP2Q0VG99 397 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 CUL2Q13617 745 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 RAB41Q5JT25 222 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 PRR23CQ6ZRP0 262 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 SCD5Q86SK9 330 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 C11orf74Q86VG3 221 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 TMEM25Q86YD3 366 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 ARHGAP18Q8N392 663 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 IL17RCQ8NAC3 791 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 TSTD1Q8NFU3 115 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 WBP2Q969T9 261 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 CNOT6LQ96LI5 555 aaKnown RBP18.68■□□□□ 0.58
HDDC3-201ENST00000330334 ARID3AQ99856 593 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 RTKNQ9BST9 563 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 MARK1Q9P0L2 795 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 WDR35Q9P2L0 1181 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 DEC1Q9P2X7 70 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 LSM7Q9UK45 103 aaKnown RBP18.68■□□□□ 0.58
HDDC3-201ENST00000330334 MAN1B1Q9UKM7 699 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 CDV3Q9UKY7 258 aaKnown RBP18.68■□□□□ 0.58
HDDC3-201ENST00000330334 KIAA1257Q9ULG3 409 aa18.68■□□□□ 0.58
HDDC3-201ENST00000330334 TRIM49BA6NDI0 452 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 TULP3O75386 442 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 EPN2O95208 641 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 ZNF806P0C7X5 589 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 RALAP11233 206 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 TBXAS1P24557 533 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-201ENST00000330334 ATXN1P54253 815 aaKnown RBP18.67■□□□□ 0.58
HDDC3-201ENST00000330334 SEC13P55735 322 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 PLK5Q496M5 336 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 USP39Q53GS9 565 aaKnown RBP18.67■□□□□ 0.58
HDDC3-201ENST00000330334 NETO1Q8TDF5 533 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 JAKMIP2Q96AA8 810 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 NAGPAQ9UK23 515 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-201ENST00000330334 STARD13Q9Y3M8 1113 aa18.67■□□□□ 0.58
HDDC3-201ENST00000330334 TBC1D3BA6NDS4 549 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 PPP1R3GB7ZBB8 358 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 P4HA2O15460 535 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 RHOBTB1O94844 696 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 IRF1P10914 325 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 CD44P16070 742 aaKnown RBP18.66■□□□□ 0.58
HDDC3-201ENST00000330334 COG7P83436 770 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 ANO4Q32M45 955 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 EOGTQ5NDL2 527 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 PLA2G2CQ5R387 149 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 C10orf120Q5SQS8 335 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 PM20D1Q6GTS8 502 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 TTI2Q6NXR4 508 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 Q6ZNB5 142 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 PIGZQ86VD9 579 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 SFTPA1Q8IWL2 248 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 ZNF510Q9Y2H8 683 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.66■□□□□ 0.58
HDDC3-201ENST00000330334 SDK1Q7Z5N4 2213 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 MYH10P35580 1976 aa18.66■□□□□ 0.58
HDDC3-201ENST00000330334 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 SLC30A4O14863 429 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 CACNG3O60359 315 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 ALDH1A2O94788 518 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 BMP6P22004 513 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 FMO5P49326 533 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 MORC3Q14149 939 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 ELF2Q15723 593 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 SGO2Q562F6 1265 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 TRMT11Q7Z4G4 463 aaKnown RBP18.65■□□□□ 0.58
HDDC3-201ENST00000330334 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 ALLCQ8N6M5 410 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 UBR7Q8N806 425 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 TERB1Q8NA31 727 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 TXNDC5Q8NBS9 432 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms