RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TRIM9Q9C026 710 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 C12orf65Q9H3J6 166 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 SMYD3Q9H7B4 428 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ROPN1Q9HAT0 212 aaPredicted RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 GIN1Q9NXP7 522 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 CHORDC1Q9UHD1 332 aaPredicted RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 GRID1Q9ULK0 1009 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ARHGAP42A6NI28 874 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 EDF1O60869 148 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 MED24O75448 989 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ZWINTO95229 277 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 PARNO95453 639 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 NR4A1P22736 598 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 PEX2P28328 305 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 DSTNP60981 165 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 CPSF7Q8N684 471 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 SLC26A7Q8TE54 656 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 LPAR1Q92633 364 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 VTI1AQ96AJ9 217 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ZBED2Q9BTP6 218 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ASIC3Q9UHC3 531 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 MRPL11Q9Y3B7 192 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 NR2E3Q9Y5X4 410 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 TMEM150BA6NC51 233 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 GOLGA8JA6NMD2 632 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 UQCRBP14927 111 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 NAGAP17050 411 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 VCPP55072 806 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 RPS3AP61247 264 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SPARCL1Q14515 664 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CEP78Q5JTW2 689 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 OGFOD2Q6N063 350 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 C11orf96Q7Z7L8 435 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ANKRD13AQ8IZ07 590 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ANKRD35Q8N283 1001 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ELMOD1Q8N336 334 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CALML6Q8TD86 181 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CNBD2Q96M20 576 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 PANX3Q96QZ0 392 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 DICER1Q9UPY3 1922 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CYP2C8P10632 490 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ITGB5P18084 799 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 NIPAL4Q0D2K0 466 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 GRM2Q14416 872 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 COG2Q14746 738 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 KRT79Q5XKE5 535 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 FBXL19Q6PCT2 694 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TMC7Q7Z402 723 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CADM3Q8N126 398 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CALML4Q96GE6 196 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TMEM109Q9BVC6 243 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 BLOC1S4Q9NUP1 217 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 RRN3Q9NYV6 651 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 AGO2Q9UKV8 859 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TCRBV7S2A1N4TA0A589 114 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ARHGAP10A1A4S6 786 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 FAM25EA8MYX2 175 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 PMLP29590 882 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SREBF1P36956 1147 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 IST1P53990 364 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 IFITM2Q01629 132 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 PRKCEQ02156 737 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CNTN2Q02246 1040 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 FOLH1Q04609 750 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 DHX34Q14147 1143 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 GK3PQ14409 553 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 STILQ15468 1287 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ITPRIPL1Q6GPH6 555 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 CNNM4Q6P4Q7 775 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 GALNT7Q86SF2 657 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 PDSS2Q86YH6 399 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TPH2Q8IWU9 490 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TRIML2Q8N7C3 387 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 GDPD5Q8WTR4 605 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 ALG3Q92685 438 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 MTBPQ96DY7 904 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 RMDN3Q96TC7 470 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 PAIP1Q9H074 479 aaKnown RBP10.68□□□□□ -0.7
SF3B2-201ENST00000322535 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 KBTBD4Q9NVX7 518 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 SEPT10Q9P0V9 454 aa10.68□□□□□ -0.7
SF3B2-201ENST00000322535 MYMKA6NI61 221 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 ZBTB48P10074 688 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 MARCKSL1P49006 195 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 RNF207Q6ZRF8 634 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms