RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 SLC1A6P48664 564 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 PKNOX1P55347 436 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 CCNIQ14094 377 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 WDR36Q8NI36 951 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 MXRA8Q9BRK3 442 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 SAMD9Q5K651 1589 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ASNA1O43681 348 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 NFIXQ14938 502 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 AADACL2Q6P093 401 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 PYDC1Q8WXC3 89 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 LACRTQ9GZZ8 138 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 WDR27A2RRH5 827 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 CCT3P49368 545 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 ORC2Q13416 577 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 LRRN4Q8WUT4 740 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 LRRC6Q86X45 466 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 RIBC1Q8N443 379 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 SH3BP4Q9P0V3 963 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 TMCC3Q9ULS5 477 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM86B1E9PN63 330 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 VPS26AO75436 327 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 FGFR1P11362 822 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 CYP2C9P11712 490 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 PPATQ06203 517 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 DGCR6Q14129 220 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 RNFT2Q96EX2 444 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 ZMPSTE24O75844 475 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 RRM1P23921 792 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 LSM3P62310 102 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 SPPL2AQ8TCT8 520 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 NAALADL1Q9UQQ1 740 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 GRB10Q13322 594 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 INAQ16352 499 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 TFAP2DQ7Z6R9 452 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 GATAD2AQ86YP4 633 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 COPS7BQ9H9Q2 264 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 GPAMQ9HCL2 828 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 KLHL20Q9Y2M5 609 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
TSPAN3-201ENST00000267970 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 C2orf81A6NN90 581 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 PSMD11O00231 422 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 CALB2P22676 271 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 KLRK1P26718 216 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 TFDP3Q5H9I0 405 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SETD3Q86TU7 594 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 GRIP2Q9C0E4 1043 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 DUSP12Q9UNI6 340 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 NFICP08651 508 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 RASA1P20936 1047 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ALDH1A3P47895 512 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SRP54P61011 504 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 POLD3Q15054 466 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 NCF4Q15080 339 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 EDEM1Q92611 657 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SERHL2Q9H4I8 314 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SERHLQ9NQF3 203 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 PIAS1O75925 651 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 JCHAINP01591 159 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 HSPA13P48723 471 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 MTFR1Q15390 333 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 PDZK1Q5T2W1 519 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ZNF571Q7Z3V5 609 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 DDI1Q8WTU0 396 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 LRRC39Q96DD0 335 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 POLR1BQ9H9Y6 1135 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 CLCN3P51790 818 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 N4BP2L1Q5TBK1 243 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ADAM32Q8TC27 787 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 MYLK2Q9H1R3 596 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ATG7O95352 703 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 CPA3P15088 417 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 CYP11B1P15538 503 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 NR6A1Q15406 480 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 BCL2L14Q9BZR8 327 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 CYP39A1Q9NYL5 469 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SDR42E2A6NKP2 422 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 TP73O15350 636 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 MSH4O15457 936 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 SPAG6O75602 509 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms