RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 CCDC33Q8N5R6 958 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 SRPK1Q96SB4 655 aaKnown RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 TRIM56Q9BRZ2 755 aaKnown RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 DENND2DQ9H6A0 471 aaPredicted RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 KCNK13Q9HB14 408 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 POPDC2Q9HBU9 364 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 FAM49BQ9NUQ9 324 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 ETNK2Q9NVF9 386 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 RBPJLQ9UBG7 517 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 LNPEPQ9UIQ6 1025 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 PDK2Q15119 407 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 PPP1R26Q5T8A7 1209 aaPredicted RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 CAND1Q86VP6 1230 aaKnown RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 SCUBE3Q8IX30 993 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 STK32AQ8WU08 396 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 SNRNP25Q9BV90 132 aaKnown RBP20.51■□□□□ 0.87
NEIL3-201ENST00000264596 KLC2Q9H0B6 622 aa20.51■□□□□ 0.87
NEIL3-201ENST00000264596 UGT1A9O60656 530 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 SDC4P31431 198 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 SLC8A3P57103 927 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 BMPR2Q13873 1038 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 TTLL4Q14679 1199 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 FAM187BQ17R55 369 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 RFWD3Q6PCD5 774 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 ACOT1Q86TX2 421 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 MECRQ9BV79 373 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 MIS12Q9H081 205 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 UGT1A7Q9HAW7 530 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 UGT1A10Q9HAW8 530 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 UGT1A8Q9HAW9 530 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 ITGA11Q9UKX5 1188 aa20.5■□□□□ 0.87
NEIL3-201ENST00000264596 DNAJC25-GNG10A0A024R161 153 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 C1QAP02745 245 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 GNAZP19086 355 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 TGM2P21980 687 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 TAF11Q15544 211 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 BOLA3Q53S33 107 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 OLFML1Q6UWY5 402 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 BZW1Q7L1Q6 419 aaKnown RBP20.49■□□□□ 0.87
NEIL3-201ENST00000264596 NLRP7Q8WX94 980 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 ACAP3Q96P50 834 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 PNPLA8Q9NP80 782 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 OTOFQ9HC10 1997 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 DLDP09622 509 aaKnown RBP20.49■□□□□ 0.87
NEIL3-201ENST00000264596 TPBGLP0DKB5 382 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 CDK16Q00536 496 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 TTC30AQ86WT1 665 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 MAB21L3Q8N8X9 362 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
NEIL3-201ENST00000264596 CADM1Q9BY67 442 aaKnown RBP20.49■□□□□ 0.87
NEIL3-201ENST00000264596 B3GNT5Q9BYG0 378 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 SLC13A1Q9BZW2 595 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 CXCL16Q9H2A7 254 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 PLAC1Q9HBJ0 212 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 SMYD2Q9NRG4 433 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 CNTN3Q9P232 1028 aa20.49■□□□□ 0.87
NEIL3-201ENST00000264596 MTO1Q9Y2Z2 717 aaKnown RBP20.49■□□□□ 0.87
NEIL3-201ENST00000264596 FAM237BA0A1B0GVD1 139 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 KRT37O76014 449 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 LGALS2P05162 132 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 TFE3P19532 575 aaPredicted RBP20.48■□□□□ 0.87
NEIL3-201ENST00000264596 ZNF484Q5JVG2 852 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 WASHC2DQ5SRD0 308 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 SKA1Q96BD8 255 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 MAD1L1Q9Y6D9 718 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 CCDC22O60826 627 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 SNRPAP09012 282 aaKnown RBP20.48■□□□□ 0.87
NEIL3-201ENST00000264596 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 MYL2P10916 166 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 CCNG1P51959 295 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 TTC7BQ86TV6 843 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 RTP4Q96DX8 246 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 PTCD3Q96EY7 689 aaKnown RBP20.48■□□□□ 0.87
NEIL3-201ENST00000264596 TLE6Q9H808 572 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 SNX9Q9Y5X1 595 aa20.48■□□□□ 0.87
NEIL3-201ENST00000264596 CCDC195A0A1B0GUA6 201 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 HNRNPCL1O60812 293 aaKnown RBP20.47■□□□□ 0.87
NEIL3-201ENST00000264596 SLC6A3Q01959 620 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 GPC2Q8N158 579 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 ARMC2Q8NEN0 867 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 NSL1Q96IY1 281 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 LPIN3Q9BQK8 851 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 BTBD10Q9BSF8 475 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 MAGEB5Q9BZ81 275 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 KIAA1257Q9ULG3 409 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 BCLAF3A2AJT9 711 aaKnown RBP20.47■□□□□ 0.87
NEIL3-201ENST00000264596 DPYSL4O14531 572 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 TGDSO95455 350 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 METTL18O95568 372 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 CSH1P0DML2 217 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 CSH2P0DML3 217 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 ATXN1P54253 815 aaKnown RBP20.47■□□□□ 0.87
NEIL3-201ENST00000264596 SATB1Q01826 763 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 UNC5AQ6ZN44 842 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms