RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MYCT1Q8N699 235 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 OR1N1Q8NGS0 311 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 ACTRT2Q8TDY3 377 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 PRR25Q96S07 402 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 ARHGEF3Q9NR81 526 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 DLL3Q9NYJ7 618 aa5.2□□□□□ -1.58
CCDC54-201ENST00000261058 NKX1-2Q9UD57 310 aaPredicted RBP5.2□□□□□ -1.58
CCDC54-201ENST00000261058 TMEM191CA6NGB0 347 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 TRIM38O00635 465 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 WDR47O94967 919 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PROZP22891 400 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PNLIPRP1P54315 467 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 SIM1P81133 766 aaPredicted RBP5.19□□□□□ -1.58
CCDC54-201ENST00000261058 ST3GAL2Q16842 350 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 CLEC9AQ6UXN8 241 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PARS2Q7L3T8 475 aaKnown RBP5.19□□□□□ -1.58
CCDC54-201ENST00000261058 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCDC54-201ENST00000261058 SPATA5Q8NB90 893 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 TRAPPC12Q8WVT3 735 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 CAVIN3Q969G5 261 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PRPF18Q99633 342 aaKnown RBP5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PAAF1Q9BRP4 392 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 FSD1LQ9BXM9 530 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 MYLK2Q9H1R3 596 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 DUSP22Q9NRW4 184 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 LPAR3Q9UBY5 353 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 PACSIN3Q9UKS6 424 aa5.19□□□□□ -1.58
CCDC54-201ENST00000261058 LINC00473A8K010 186 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 H0YIZ8 118 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 TAF5LO75529 589 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 LMNAP02545 664 aaKnown RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 MCM5P33992 734 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 RARRES1P49788 294 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 TPTEP56180 551 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 POLE2P56282 527 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 EIF4A1P60842 406 aaKnown RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 KCNJ12Q14500 433 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 ZRSR2Q15696 482 aaKnown RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 AASDHQ4L235 1098 aaPredicted RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 C4orf46Q504U0 113 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 LAIR1Q6GTX8 287 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 DPY19L3Q6ZPD9 716 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 CERS3Q8IU89 383 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 C11orf44Q8N8P7 122 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 ANKRD42Q8N9B4 389 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 OTUD7AQ8TE49 926 aaPredicted RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 XAGE5Q8WWM1 108 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 NEU4Q8WWR8 484 aaPredicted RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 GRAMD1AQ96CP6 724 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 DDX23Q9BUQ8 820 aaKnown RBP5.18□□□□□ -1.58
CCDC54-201ENST00000261058 PRDM8Q9NQV8 689 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 LRFN1Q9P244 771 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 LRIT1Q9P2V4 623 aa5.18□□□□□ -1.58
CCDC54-201ENST00000261058 GCOM1H8Y6P7 765 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 J3KTA2 159 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 PSMD9O00233 223 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 ZSCAN9O15535 394 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 ITGA2BP08514 1039 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 DLDP09622 509 aaKnown RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 ALDH18A1P54886 795 aaKnown RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 E2F1Q01094 437 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 GRM4Q14833 912 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 JMJD6Q6NYC1 403 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 MSANTD2Q6P1R3 559 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 LDHAL6AQ6ZMR3 332 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 PIK3AP1Q6ZUJ8 805 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 PTCHD4Q6ZW05 846 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 NRSN1Q8IZ57 195 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 FSTL5Q8N475 847 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 BBC3Q96PG8 261 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 LENG8Q96PV6 779 aaPredicted RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 PABPC3Q9H361 631 aaKnown RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 HERC5Q9UII4 1024 aaKnown RBP5.17□□□□□ -1.58
CCDC54-201ENST00000261058 GPR52Q9Y2T5 361 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 ENTPD2Q9Y5L3 495 aa5.17□□□□□ -1.58
CCDC54-201ENST00000261058 POLR2AP24928 1970 aaKnown RBP5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A18PA6NE21 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A16PA6NEW6 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A9PA6NNJ1 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A5PA8MXJ8 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 IPO5O00410 1097 aaKnown RBP5.16□□□□□ -1.58
CCDC54-201ENST00000261058 ZNF213O14771 459 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 MGST3O14880 152 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 TTLL1O95922 423 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 GCP02774 474 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A15PP0C7V4 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 FAM90A14PP0C7W9 464 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 SRGAP2BP0DMP2 458 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 TMEM225BP0DP42 221 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 DRD4P21917 467 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 PBX1P40424 430 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 CDK7P50613 346 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 SUMO2P61956 95 aaKnown RBP5.16□□□□□ -1.58
CCDC54-201ENST00000261058 ZXDAP98168 799 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 AARS2Q5JTZ9 985 aaKnown RBP5.16□□□□□ -1.58
CCDC54-201ENST00000261058 LRRC71Q8N4P6 559 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 OVCA2Q8WZ82 227 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 CCT6BQ92526 530 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms