RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 IDH3BO43837 385 aa8.47□□□□□ -1.05
APOB-201ENST00000233242 TTLL9Q3SXZ7 439 aa8.47□□□□□ -1.05
APOB-201ENST00000233242 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
APOB-201ENST00000233242 KLHL17Q6TDP4 642 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 CPNE1Q99829 537 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 PTPN7P35236 360 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 CNTN1Q12860 1018 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 MAD2L1Q13257 205 aaPredicted RBP8.46□□□□□ -1.05
APOB-201ENST00000233242 SDE2Q6IQ49 451 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 ABRAXAS1Q6UWZ7 409 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 OR7A2PQ8NGA2 310 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 TCP10LQ8TDR4 215 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 RNFT2Q96EX2 444 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 PPP1R10Q96QC0 940 aaKnown RBP8.46□□□□□ -1.05
APOB-201ENST00000233242 PRDM16Q9HAZ2 1276 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 DYRK4Q9NR20 520 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 SPATA2Q9UM82 520 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 NR5A2O00482 541 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 PRPF4O43172 522 aaKnown RBP eCLIP8.46□□□□□ -1.052e-20■■■■■ 28.9
APOB-201ENST00000233242 NPTXRO95502 500 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 ZNF846Q147U1 533 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 RINLQ6ZS11 566 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 CYP4Z2PQ8N1L4 340 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 PDPRQ8NCN5 879 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 ATG4AQ8WYN0 398 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 RNPEPQ9H4A4 650 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 F8W810 466 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 MAFGO15525 162 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 IL12AP29459 219 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 CCT3P49368 545 aaKnown RBP8.46□□□□□ -1.05
APOB-201ENST00000233242 IFI35P80217 286 aaPredicted RBP8.46□□□□□ -1.05
APOB-201ENST00000233242 C8orf59Q8N0T1 100 aaPredicted RBP8.46□□□□□ -1.05
APOB-201ENST00000233242 AADATQ8N5Z0 425 aa8.46□□□□□ -1.05
APOB-201ENST00000233242 F5H6K3 240 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 SHOX2O60902 331 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 CD4P01730 458 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 KLRC3Q07444 240 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 CUL2Q13617 745 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 GTF2H3Q13889 308 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 FAM153CQ494X1 144 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 KCTD21Q4G0X4 260 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 TMEM26Q6ZUK4 368 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 TMC2Q8TDI7 906 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 USP13Q92995 863 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 SIK2Q9H0K1 926 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 MATN2O00339 956 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 MSH3P20585 1137 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 IL5RAQ01344 420 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 DPYSQ14117 519 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 ZNF571Q7Z3V5 609 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 GPAMQ9HCL2 828 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 PIPSLA2A3N6 862 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 VPS26AO75436 327 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 TPBGLP0DKB5 382 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 MLNP12872 115 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 ALOX12P18054 663 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 DNAJB2P25686 324 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 LRRC74AQ0VAA2 488 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 ZFP42Q96MM3 310 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 MTMR4Q9NYA4 1195 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 FOXN3O00409 490 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 LCP1P13796 627 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 CCT8P50990 548 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 CLEC16AQ2KHT3 1053 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 RFX4Q33E94 735 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 ATG16L2Q8NAA4 619 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 GPR101Q96P66 508 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 KIAA1683Q9H0B3 1180 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 RNF146Q9NTX7 359 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 METP08581 1390 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 AP5Z1O43299 807 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 COX10Q12887 443 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 TTLL4Q14679 1199 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 N4BP2L1Q5TBK1 243 aaPredicted RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 GRTP1Q5TC63 336 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 SNX31Q8N9S9 440 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 STX11O75558 287 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 CCNA2P20248 432 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 CDC73Q6P1J9 531 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 SPATA16Q9BXB7 569 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 RGS18Q9NS28 235 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 UNC13AQ9UPW8 1703 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 TWF2Q6IBS0 349 aaKnown RBP8.46□□□□□ -1.06
APOB-201ENST00000233242 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.06
APOB-201ENST00000233242 HSMCR30P0CW71 290 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 PRKG1Q13976 671 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 DPP10Q8N608 796 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SLC44A5Q8NCS7 719 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 CHID1Q9BWS9 393 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FLT1P17948 1338 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 PRDX5P30044 214 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ADSSP30520 456 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms