RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YGR121W-AQ3E816 71 aa-0.23□□□□□ -2.45
BRO1YPL084W YHR073W-AP0C5N7 58 aa-0.24□□□□□ -2.45
BRO1YPL084W YDR246W-AQ3E763 66 aa-0.24□□□□□ -2.45
BRO1YPL084W YBL044WP38194 122 aa-0.24□□□□□ -2.45
BRO1YPL084W YIL156W-BQ2V2P4 73 aa-0.25□□□□□ -2.45
BRO1YPL084W YOR105WQ08504 108 aa-0.3□□□□□ -2.46
BRO1YPL084W YGL194C-AQ2V2P6 80 aa-0.31□□□□□ -2.46
BRO1YPL084W PMP3P87284 55 aa-0.31□□□□□ -2.46
BRO1YPL084W YOR192C-CQ3E736 78 aa-0.32□□□□□ -2.46
BRO1YPL084W TIM12P32830 109 aa-0.32□□□□□ -2.46
BRO1YPL084W YPR145C-AQ2V2P0 78 aa-0.32□□□□□ -2.46
BRO1YPL084W SPI1P40092 148 aa-0.33□□□□□ -2.46
BRO1YPL084W YHR050W-AQ05451 56 aa-0.34□□□□□ -2.46
BRO1YPL084W YKL065W-AQ2V2P2 73 aa-0.34□□□□□ -2.46
BRO1YPL084W YDL022C-AP0C5L6 82 aa-0.35□□□□□ -2.47
BRO1YPL084W YOR011W-AQ3E807 68 aa-0.35□□□□□ -2.47
BRO1YPL084W YOR314WQ12506 109 aa-0.36□□□□□ -2.47
BRO1YPL084W CWP2P43497 92 aa-0.37□□□□□ -2.47
BRO1YPL084W POC4Q12245 148 aaPredicted RBP-0.38□□□□□ -2.47
BRO1YPL084W YKL023C-AQ2V2P3 75 aa-0.39□□□□□ -2.47
BRO1YPL084W YGL258W-AQ3E740 77 aa-0.4□□□□□ -2.47
BRO1YPL084W YBL039W-BP0C268 59 aa-0.41□□□□□ -2.47
BRO1YPL084W YMR001C-AQ8TGS9 76 aa-0.42□□□□□ -2.48
BRO1YPL084W YLR157W-DP0CE99 70 aa-0.42□□□□□ -2.48
BRO1YPL084W SWM2P40342 146 aa-0.45□□□□□ -2.48
BRO1YPL084W DDR2P89113 61 aa-0.45□□□□□ -2.48
BRO1YPL084W ATP17Q06405 101 aa-0.45□□□□□ -2.48
BRO1YPL084W YDR182W-AQ3E796 67 aa-0.45□□□□□ -2.48
BRO1YPL084W YOR072W-BQ3E832 53 aa-0.46□□□□□ -2.48
BRO1YPL084W RPL29P05747 59 aaPredicted RBP-0.47□□□□□ -2.48
BRO1YPL084W QCR9P22289 66 aa-0.47□□□□□ -2.48
BRO1YPL084W LSM2P38203 95 aaKnown RBP-0.47□□□□□ -2.48
BRO1YPL084W YBR200W-AQ3E755 54 aa-0.47□□□□□ -2.48
BRO1YPL084W YKL018C-AQ3E7A7 99 aa-0.47□□□□□ -2.48
BRO1YPL084W YLR342W-AQ3E810 57 aa-0.47□□□□□ -2.49
BRO1YPL084W COA2Q3E823 68 aa-0.47□□□□□ -2.49
BRO1YPL084W YLR146W-AQ2V2P1 62 aa-0.48□□□□□ -2.49
BRO1YPL084W COX9P07255 59 aa-0.48□□□□□ -2.49
BRO1YPL084W OLI1P61829 76 aa-0.49□□□□□ -2.49
BRO1YPL084W YOR008C-AQ3E7B9 74 aa-0.49□□□□□ -2.49
BRO1YPL084W YOR394C-AQ8TGJ0 55 aa-0.51□□□□□ -2.49
BRO1YPL084W YJL133C-AQ3E7A3 74 aa-0.54□□□□□ -2.5
BRO1YPL084W TOS6P48560 102 aa-0.55□□□□□ -2.5
BRO1YPL084W YOL131WQ08270 108 aa-0.55□□□□□ -2.5
BRO1YPL084W YDR119W-AQ2V2P9 66 aa-0.56□□□□□ -2.5
BRO1YPL084W PAU7P39545 55 aa-0.58□□□□□ -2.5
BRO1YPL084W YBR230W-AQ3E762 66 aa-0.58□□□□□ -2.5
BRO1YPL084W YOR316C-AQ3E806 69 aa-0.6□□□□□ -2.51
BRO1YPL084W YJL127C-BQ3E828 52 aa-0.6□□□□□ -2.51
BRO1YPL084W SMX2P40204 77 aaKnown RBP-0.61□□□□□ -2.51
BRO1YPL084W SSS1P35179 80 aa-0.63□□□□□ -2.51
BRO1YPL084W HUB1Q6Q546 73 aa-0.67□□□□□ -2.52
BRO1YPL084W YLL006W-AQ3E814 58 aa-0.68□□□□□ -2.52
BRO1YPL084W YHR213W-AQ8TGT4 77 aa-0.69□□□□□ -2.52
BRO1YPL084W YGR146C-AQ8TGT9 53 aa-0.72□□□□□ -2.52
BRO1YPL084W RPS30AP0CX33 63 aaKnown RBP-0.75□□□□□ -2.53
BRO1YPL084W RPS30BP0CX34 63 aaKnown RBP-0.75□□□□□ -2.53
BRO1YPL084W YFL041W-AQ3E817 63 aa-0.77□□□□□ -2.53
BRO1YPL084W YSY6P38374 65 aa-0.84□□□□□ -2.54
BRO1YPL084W PAI3P01094 68 aa-0.84□□□□□ -2.54
BRO1YPL084W YOL166W-AQ8TGJ1 51 aa-0.88□□□□□ -2.55
BRO1YPL084W YIL102C-AQ2V2P5 75 aa-0.93□□□□□ -2.56
BRO1YPL084W VMA9Q3E7B6 73 aa-1.17□□□□□ -2.6
Retrieved 63 of 5,963 RNA–protein pairs in 94 ms