RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YBR016WP38216 128 aa4.17□□□□□ -1.74
LSP1YPL004C YGL034CP53186 121 aa4.16□□□□□ -1.74
LSP1YPL004C YBL008W-AQ3E821 79 aa4.16□□□□□ -1.74
LSP1YPL004C COX8P04039 78 aa4.15□□□□□ -1.75
LSP1YPL004C YDR210WQ03482 75 aa4.15□□□□□ -1.75
LSP1YPL004C YDR119W-AQ2V2P9 66 aa4.14□□□□□ -1.75
LSP1YPL004C YDR246W-AQ3E763 66 aa4.14□□□□□ -1.75
LSP1YPL004C YPL038W-AQ3E7B4 63 aa4.14□□□□□ -1.75
LSP1YPL004C YKL065W-AQ2V2P2 73 aa4.13□□□□□ -1.75
LSP1YPL004C YOL166W-AQ8TGJ1 51 aa4.13□□□□□ -1.75
LSP1YPL004C YHR125WP38831 101 aa4.12□□□□□ -1.75
LSP1YPL004C RUB1Q03919 77 aa4.12□□□□□ -1.75
LSP1YPL004C YDR182W-AQ3E796 67 aa4.08□□□□□ -1.76
LSP1YPL004C YIL156W-BQ2V2P4 73 aa4.05□□□□□ -1.76
LSP1YPL004C AIM4P38305 123 aaPredicted RBP4.04□□□□□ -1.76
LSP1YPL004C OLI1P61829 76 aa4.03□□□□□ -1.76
LSP1YPL004C YFR032C-BQ8TGU2 87 aa4.03□□□□□ -1.76
LSP1YPL004C RPS30AP0CX33 63 aaKnown RBP4.01□□□□□ -1.77
LSP1YPL004C RPS30BP0CX34 63 aaKnown RBP4.01□□□□□ -1.77
LSP1YPL004C YML054C-AQ3E809 52 aa3.97□□□□□ -1.77
LSP1YPL004C YIL002W-AQ3E7Z5 69 aa3.96□□□□□ -1.78
LSP1YPL004C TOM6P33448 61 aa3.94□□□□□ -1.78
LSP1YPL004C MRX7P53869 86 aa3.94□□□□□ -1.78
LSP1YPL004C SDH6Q3E785 79 aa3.94□□□□□ -1.78
LSP1YPL004C OST5Q92316 86 aa3.92□□□□□ -1.78
LSP1YPL004C YBR201C-AQ2V2Q3 67 aa3.91□□□□□ -1.78
LSP1YPL004C YBL044WP38194 122 aa3.9□□□□□ -1.79
LSP1YPL004C YMR001C-AQ8TGS9 76 aa3.86□□□□□ -1.79
LSP1YPL004C HUB1Q6Q546 73 aa3.77□□□□□ -1.81
LSP1YPL004C YER175W-AQ8TGU4 54 aa3.72□□□□□ -1.81
LSP1YPL004C YOR394C-AQ8TGJ0 55 aa3.71□□□□□ -1.82
LSP1YPL004C RPS29BP41058 56 aaKnown RBP3.7□□□□□ -1.82
LSP1YPL004C RPL37AP49166 88 aaKnown RBP3.64□□□□□ -1.83
LSP1YPL004C RPS29AP41057 56 aaKnown RBP3.63□□□□□ -1.83
LSP1YPL004C ATP17Q06405 101 aa3.62□□□□□ -1.83
LSP1YPL004C YMR122CQ03879 124 aa3.58□□□□□ -1.84
LSP1YPL004C YER188C-AP0C0V2 99 aa3.54□□□□□ -1.84
LSP1YPL004C YOR381W-AQ3E804 55 aa3.51□□□□□ -1.85
LSP1YPL004C RPS28BP0C0X0 67 aaKnown RBP3.5□□□□□ -1.85
LSP1YPL004C YIR021W-AQ3E739 70 aa3.5□□□□□ -1.85
LSP1YPL004C RPS28AQ3E7X9 67 aaPredicted RBP3.5□□□□□ -1.85
LSP1YPL004C YBR121C-AP0C5L4 52 aa3.48□□□□□ -1.85
LSP1YPL004C YCR095W-AQ3E787 52 aa3.47□□□□□ -1.85
LSP1YPL004C YCR108CQ3E819 63 aa3.47□□□□□ -1.85
LSP1YPL004C YEL014CP39999 101 aa3.39□□□□□ -1.87
LSP1YPL004C YOR072W-BQ3E832 53 aa3.33□□□□□ -1.88
LSP1YPL004C SBH1P52870 82 aa3.29□□□□□ -1.88
LSP1YPL004C YLR412C-AQ3E742 68 aa3.29□□□□□ -1.88
LSP1YPL004C YNL277W-AQ3E7Z0 62 aa3.24□□□□□ -1.89
LSP1YPL004C QCR10P37299 77 aa3.23□□□□□ -1.89
LSP1YPL004C HHY1P39982 102 aa3.08□□□□□ -1.92
LSP1YPL004C YGL014C-AP0C5N1 53 aa3□□□□□ -1.93
LSP1YPL004C YER078W-AQ3E7A2 54 aa2.96□□□□□ -1.94
LSP1YPL004C YML100W-AQ8TGT0 57 aa2.96□□□□□ -1.94
LSP1YPL004C YBR072C-AQ3E794 53 aa2.95□□□□□ -1.94
LSP1YPL004C SOM1Q05676 74 aa2.94□□□□□ -1.94
LSP1YPL004C YOR376W-AQ3E805 51 aa2.88□□□□□ -1.95
LSP1YPL004C YHR050W-AQ05451 56 aa2.77□□□□□ -1.97
LSP1YPL004C YHR032W-AP0C5N6 59 aa2.54□□□□□ -2
LSP1YPL004C YAL067W-AQ8TGK6 75 aa2.47□□□□□ -2.01
LSP1YPL004C YLR157W-EP0CF00 54 aa2.12□□□□□ -2.07
LSP1YPL004C YOL164W-AQ3E7A5 60 aa2.06□□□□□ -2.08
LSP1YPL004C YHR086W-AQ3E746 53 aa1.98□□□□□ -2.09
Retrieved 63 of 5,963 RNA–protein pairs in 36.1 ms