RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YGR146C-AQ8TGT9 53 aa1.76□□□□□ -2.13
SSL1YLR005W OLI1P61829 76 aa1.75□□□□□ -2.13
SSL1YLR005W EMC6Q12431 108 aa1.75□□□□□ -2.13
SSL1YLR005W YIL156W-BQ2V2P4 73 aa1.74□□□□□ -2.13
SSL1YLR005W LSO2Q3E772 92 aaKnown RBP1.74□□□□□ -2.13
SSL1YLR005W YKL065W-AQ2V2P2 73 aa1.73□□□□□ -2.13
SSL1YLR005W YFL041W-AQ3E817 63 aa1.73□□□□□ -2.13
SSL1YLR005W YSY6P38374 65 aa1.72□□□□□ -2.13
SSL1YLR005W RPL37AP49166 88 aaKnown RBP1.72□□□□□ -2.13
SSL1YLR005W YLR285C-AQ3E771 56 aa1.72□□□□□ -2.13
SSL1YLR005W YFR032C-BQ8TGU2 87 aa1.72□□□□□ -2.13
SSL1YLR005W YOL013W-AP0C272 63 aaPredicted RBP1.71□□□□□ -2.14
SSL1YLR005W RPS30AP0CX33 63 aaKnown RBP1.71□□□□□ -2.14
SSL1YLR005W RPS30BP0CX34 63 aaKnown RBP1.71□□□□□ -2.14
SSL1YLR005W YBL044WP38194 122 aa1.71□□□□□ -2.14
SSL1YLR005W AIM4P38305 123 aaPredicted RBP1.7□□□□□ -2.14
SSL1YLR005W YIL102CP40488 101 aa1.69□□□□□ -2.14
SSL1YLR005W YOR314WQ12506 109 aa1.69□□□□□ -2.14
SSL1YLR005W ATX1P38636 73 aa1.67□□□□□ -2.14
SSL1YLR005W MRX7P53869 86 aa1.66□□□□□ -2.14
SSL1YLR005W YHR086W-AQ3E746 53 aa1.65□□□□□ -2.15
SSL1YLR005W INO4P13902 151 aa1.62□□□□□ -2.15
SSL1YLR005W YBR201C-AQ2V2Q3 67 aa1.61□□□□□ -2.15
SSL1YLR005W NOP10Q6Q547 58 aaPredicted RBP1.59□□□□□ -2.15
SSL1YLR005W YML100W-AQ8TGT0 57 aa1.59□□□□□ -2.15
SSL1YLR005W OST5Q92316 86 aa1.59□□□□□ -2.16
SSL1YLR005W YOR394C-AQ8TGJ0 55 aa1.57□□□□□ -2.16
SSL1YLR005W SDH6Q3E785 79 aa1.55□□□□□ -2.16
SSL1YLR005W YDR182W-AQ3E796 67 aa1.55□□□□□ -2.16
SSL1YLR005W YOL166W-AQ8TGJ1 51 aa1.55□□□□□ -2.16
SSL1YLR005W YFL065CP43539 102 aa1.54□□□□□ -2.16
SSL1YLR005W YPR203WQ08994 102 aa1.54□□□□□ -2.16
SSL1YLR005W SBH1P52870 82 aa1.53□□□□□ -2.16
SSL1YLR005W ATP17Q06405 101 aa1.49□□□□□ -2.17
SSL1YLR005W YDR246W-AQ3E763 66 aa1.49□□□□□ -2.17
SSL1YLR005W SLO1Q3E784 85 aa1.49□□□□□ -2.17
SSL1YLR005W YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
SSL1YLR005W HUB1Q6Q546 73 aa1.49□□□□□ -2.17
SSL1YLR005W RPS28BP0C0X0 67 aaKnown RBP1.48□□□□□ -2.17
SSL1YLR005W RPS28AQ3E7X9 67 aaPredicted RBP1.48□□□□□ -2.17
SSL1YLR005W YMR001C-AQ8TGS9 76 aa1.48□□□□□ -2.17
SSL1YLR005W YLR412C-AQ3E742 68 aa1.47□□□□□ -2.17
SSL1YLR005W YER188C-AP0C0V2 99 aa1.45□□□□□ -2.18
SSL1YLR005W YDR119W-AQ2V2P9 66 aa1.45□□□□□ -2.18
SSL1YLR005W YOR072W-BQ3E832 53 aa1.43□□□□□ -2.18
SSL1YLR005W YMR122CQ03879 124 aa1.41□□□□□ -2.18
SSL1YLR005W TOM6P33448 61 aa1.38□□□□□ -2.19
SSL1YLR005W YOR381W-AQ3E804 55 aa1.37□□□□□ -2.19
SSL1YLR005W YCR108CQ3E819 63 aa1.34□□□□□ -2.2
SSL1YLR005W RUB1Q03919 77 aa1.3□□□□□ -2.2
SSL1YLR005W YEL014CP39999 101 aa1.29□□□□□ -2.2
SSL1YLR005W YCR095W-AQ3E787 52 aa1.26□□□□□ -2.21
SSL1YLR005W HHY1P39982 102 aa1.22□□□□□ -2.21
SSL1YLR005W YHR050W-AQ05451 56 aa1.22□□□□□ -2.21
SSL1YLR005W YIR021W-AQ3E739 70 aa1.21□□□□□ -2.21
SSL1YLR005W QCR10P37299 77 aa1.21□□□□□ -2.22
SSL1YLR005W SOM1Q05676 74 aa1.15□□□□□ -2.23
SSL1YLR005W YBR072C-AQ3E794 53 aa1.15□□□□□ -2.23
SSL1YLR005W YNL277W-AQ3E7Z0 62 aa1.12□□□□□ -2.23
SSL1YLR005W YGL014C-AP0C5N1 53 aa1.08□□□□□ -2.24
SSL1YLR005W YOR376W-AQ3E805 51 aa1.06□□□□□ -2.24
SSL1YLR005W YLR157W-EP0CF00 54 aa0.86□□□□□ -2.27
SSL1YLR005W YOL164W-AQ3E7A5 60 aa0.69□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 29 ms