RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YMR122W-AQ3E842 84 aa0.88□□□□□ -2.27
NIC96YFR002W TOM7P53507 60 aa0.87□□□□□ -2.27
NIC96YFR002W YBR201C-AQ2V2Q3 67 aa0.87□□□□□ -2.27
NIC96YFR002W YNL042W-BQ3E7Z2 85 aa0.87□□□□□ -2.27
NIC96YFR002W YSY6P38374 65 aa0.86□□□□□ -2.27
NIC96YFR002W YKL065W-AQ2V2P2 73 aa0.86□□□□□ -2.27
NIC96YFR002W YLL066W-BQ8TGJ7 56 aa0.86□□□□□ -2.27
NIC96YFR002W COX9P07255 59 aa0.85□□□□□ -2.27
NIC96YFR002W Q0032Q9ZZX7 96 aa0.85□□□□□ -2.27
NIC96YFR002W Q0017Q9ZZX8 53 aa0.85□□□□□ -2.27
NIC96YFR002W RPS30AP0CX33 63 aaKnown RBP0.84□□□□□ -2.28
NIC96YFR002W RPS30BP0CX34 63 aaKnown RBP0.84□□□□□ -2.28
NIC96YFR002W PAU7P39545 55 aa0.83□□□□□ -2.28
NIC96YFR002W YGL258W-AQ3E740 77 aa0.83□□□□□ -2.28
NIC96YFR002W YLR157W-EP0CF00 54 aa0.83□□□□□ -2.28
NIC96YFR002W SPI1P40092 148 aa0.83□□□□□ -2.28
NIC96YFR002W RPC10P40422 70 aa0.82□□□□□ -2.28
NIC96YFR002W ATP18P81450 59 aa0.82□□□□□ -2.28
NIC96YFR002W YBR072C-AQ3E794 53 aa0.81□□□□□ -2.28
NIC96YFR002W YOR011W-AQ3E807 68 aa0.8□□□□□ -2.28
NIC96YFR002W SDH6Q3E785 79 aa0.8□□□□□ -2.28
NIC96YFR002W YOL166W-AQ8TGJ1 51 aa0.8□□□□□ -2.28
NIC96YFR002W YJR107C-AP0CT86 78 aa0.79□□□□□ -2.28
NIC96YFR002W ATP17Q06405 101 aa0.79□□□□□ -2.28
NIC96YFR002W YPR108W-AQ3E7B3 70 aa0.78□□□□□ -2.28
NIC96YFR002W YLR146W-AQ2V2P1 62 aa0.78□□□□□ -2.28
NIC96YFR002W YKL023C-AQ2V2P3 75 aa0.77□□□□□ -2.29
NIC96YFR002W YOL164W-AQ3E7A5 60 aa0.77□□□□□ -2.29
NIC96YFR002W COX7P10174 60 aa0.76□□□□□ -2.29
NIC96YFR002W SMX2P40204 77 aaKnown RBP0.76□□□□□ -2.29
NIC96YFR002W YDR182W-AQ3E796 67 aa0.76□□□□□ -2.29
NIC96YFR002W PMP3P87284 55 aa0.76□□□□□ -2.29
NIC96YFR002W YBL039W-BP0C268 59 aa0.75□□□□□ -2.29
NIC96YFR002W RPL38P49167 78 aaKnown RBP0.75□□□□□ -2.29
NIC96YFR002W YBR032WP38223 100 aa0.75□□□□□ -2.29
NIC96YFR002W YBR200W-AQ3E755 54 aa0.75□□□□□ -2.29
NIC96YFR002W HUB1Q6Q546 73 aa0.75□□□□□ -2.29
NIC96YFR002W YLR157W-DP0CE99 70 aa0.74□□□□□ -2.29
NIC96YFR002W YMR001C-AQ8TGS9 76 aa0.74□□□□□ -2.29
NIC96YFR002W YOL097W-AQ3E7Y9 61 aa0.73□□□□□ -2.29
NIC96YFR002W YLR342W-AQ3E810 57 aa0.71□□□□□ -2.3
NIC96YFR002W YOR394C-AQ8TGJ0 55 aa0.7□□□□□ -2.3
NIC96YFR002W YGR025WP53216 100 aa0.68□□□□□ -2.3
NIC96YFR002W YFR009W-AP0C5M9 85 aa0.67□□□□□ -2.3
NIC96YFR002W YCR108CQ3E819 63 aa0.67□□□□□ -2.3
NIC96YFR002W YBR016WP38216 128 aa0.66□□□□□ -2.3
NIC96YFR002W YBL044WP38194 122 aa0.65□□□□□ -2.31
NIC96YFR002W YML054C-AQ3E809 52 aa0.64□□□□□ -2.31
NIC96YFR002W OLI1P61829 76 aa0.63□□□□□ -2.31
NIC96YFR002W RPL29P05747 59 aaPredicted RBP0.6□□□□□ -2.31
NIC96YFR002W YHR073W-AP0C5N7 58 aa0.6□□□□□ -2.31
NIC96YFR002W YBR230W-AQ3E762 66 aa0.6□□□□□ -2.31
NIC96YFR002W COA2Q3E823 68 aa0.59□□□□□ -2.31
NIC96YFR002W YGR146C-AQ8TGT9 53 aa0.59□□□□□ -2.32
NIC96YFR002W TOS6P48560 102 aa0.58□□□□□ -2.32
NIC96YFR002W DDR2P89113 61 aa0.58□□□□□ -2.32
NIC96YFR002W YJL133C-AQ3E7A3 74 aa0.55□□□□□ -2.32
NIC96YFR002W YLL006W-AQ3E814 58 aa0.54□□□□□ -2.32
NIC96YFR002W YOR008C-AQ3E7B9 74 aa0.52□□□□□ -2.33
NIC96YFR002W YJL127C-BQ3E828 52 aa0.47□□□□□ -2.33
NIC96YFR002W YOR316C-AQ3E806 69 aa0.45□□□□□ -2.34
NIC96YFR002W YOR072W-BQ3E832 53 aa0.45□□□□□ -2.34
NIC96YFR002W YHR050W-AQ05451 56 aa0.29□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 12.5 ms