RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YBL039W-BP0C268 59 aa1□□□□□ -2.25
SIR4YDR227W YBR032WP38223 100 aa1□□□□□ -2.25
SIR4YDR227W LSM2P38203 95 aaKnown RBP1□□□□□ -2.25
SIR4YDR227W RPS22AP0C0W1 130 aaKnown RBP0.99□□□□□ -2.25
SIR4YDR227W YLR157W-DP0CE99 70 aa0.99□□□□□ -2.25
SIR4YDR227W HUA1P40325 198 aa0.99□□□□□ -2.25
SIR4YDR227W YNL190WP53872 204 aa0.99□□□□□ -2.25
SIR4YDR227W RPS22BQ3E7Y3 130 aaKnown RBP0.99□□□□□ -2.25
SIR4YDR227W COA2Q3E823 68 aa0.99□□□□□ -2.25
SIR4YDR227W YPR108W-AQ3E7B3 70 aa0.97□□□□□ -2.25
SIR4YDR227W DAD4P69851 72 aa0.96□□□□□ -2.26
SIR4YDR227W YLR285C-AQ3E771 56 aa0.96□□□□□ -2.26
SIR4YDR227W PAU7P39545 55 aa0.95□□□□□ -2.26
SIR4YDR227W YBR016WP38216 128 aa0.94□□□□□ -2.26
SIR4YDR227W SHU1P38751 150 aa0.94□□□□□ -2.26
SIR4YDR227W TOS6P48560 102 aa0.94□□□□□ -2.26
SIR4YDR227W YIL102CP40488 101 aa0.93□□□□□ -2.26
SIR4YDR227W YGR025WP53216 100 aa0.93□□□□□ -2.26
SIR4YDR227W HUB1Q6Q546 73 aa0.92□□□□□ -2.26
SIR4YDR227W YKL018C-AQ3E7A7 99 aa0.92□□□□□ -2.26
SIR4YDR227W YHR073W-AP0C5N7 58 aa0.91□□□□□ -2.26
SIR4YDR227W YJR128WP47162 119 aa0.91□□□□□ -2.26
SIR4YDR227W RPS30AP0CX33 63 aaKnown RBP0.9□□□□□ -2.27
SIR4YDR227W RPS30BP0CX34 63 aaKnown RBP0.9□□□□□ -2.27
SIR4YDR227W YMR007WQ03675 126 aa0.9□□□□□ -2.27
SIR4YDR227W YMR141CP40211 102 aa0.89□□□□□ -2.27
SIR4YDR227W YBR200W-AQ3E755 54 aa0.89□□□□□ -2.27
SIR4YDR227W PAU1P0CE88 120 aa0.89□□□□□ -2.27
SIR4YDR227W PAU14P0CE89 120 aa0.89□□□□□ -2.27
SIR4YDR227W RPL29P05747 59 aaPredicted RBP0.88□□□□□ -2.27
SIR4YDR227W DDR2P89113 61 aa0.87□□□□□ -2.27
SIR4YDR227W ATP18P81450 59 aa0.87□□□□□ -2.27
SIR4YDR227W PAU20Q08322 120 aa0.85□□□□□ -2.27
SIR4YDR227W YJR107C-AP0CT86 78 aa0.85□□□□□ -2.27
SIR4YDR227W YBR072C-AQ3E794 53 aa0.84□□□□□ -2.27
SIR4YDR227W HUG1Q6Q5K6 68 aa0.84□□□□□ -2.27
SIR4YDR227W MVB12P42939 101 aa0.83□□□□□ -2.28
SIR4YDR227W YOR394C-AQ8TGJ0 55 aa0.83□□□□□ -2.28
SIR4YDR227W YBR230W-AQ3E762 66 aa0.83□□□□□ -2.28
SIR4YDR227W YMR001C-AQ8TGS9 76 aa0.83□□□□□ -2.28
SIR4YDR227W YHR213W-BQ8TGK1 99 aa0.82□□□□□ -2.28
SIR4YDR227W YBL044WP38194 122 aa0.82□□□□□ -2.28
SIR4YDR227W RPL37AP49166 88 aaKnown RBP0.82□□□□□ -2.28
SIR4YDR227W YOR034C-AQ3E735 80 aa0.81□□□□□ -2.28
SIR4YDR227W YOL013W-AP0C272 63 aaPredicted RBP0.8□□□□□ -2.28
SIR4YDR227W YBR201C-AQ2V2Q3 67 aa0.8□□□□□ -2.28
SIR4YDR227W RPL38P49167 78 aaKnown RBP0.79□□□□□ -2.28
SIR4YDR227W YOR008C-AQ3E7B9 74 aa0.78□□□□□ -2.28
SIR4YDR227W SDH6Q3E785 79 aa0.77□□□□□ -2.29
SIR4YDR227W YFR009W-AP0C5M9 85 aa0.77□□□□□ -2.29
SIR4YDR227W HHY1P39982 102 aa0.76□□□□□ -2.29
SIR4YDR227W YJL127C-BQ3E828 52 aa0.75□□□□□ -2.29
SIR4YDR227W YJL133C-AQ3E7A3 74 aa0.74□□□□□ -2.29
SIR4YDR227W YOR072W-BQ3E832 53 aa0.74□□□□□ -2.29
SIR4YDR227W YHR050W-AQ05451 56 aa0.68□□□□□ -2.3
SIR4YDR227W YLR146W-AQ2V2P1 62 aa0.68□□□□□ -2.3
SIR4YDR227W YLL006W-AQ3E814 58 aa0.67□□□□□ -2.3
SIR4YDR227W YOR316C-AQ3E806 69 aa0.63□□□□□ -2.31
SIR4YDR227W OLI1P61829 76 aa0.63□□□□□ -2.31
SIR4YDR227W YCR108CQ3E819 63 aa0.63□□□□□ -2.31
SIR4YDR227W YLR157W-EP0CF00 54 aa0.62□□□□□ -2.31
SIR4YDR227W YGR146C-AQ8TGT9 53 aa0.6□□□□□ -2.31
SIR4YDR227W YOL164W-AQ3E7A5 60 aa0.5□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 11 ms