RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CORO7P57737 925 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 PDIA2Q13087 525 aaKnown RBP20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ANKRD20A8PQ5CZ79 823 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ANKRD22Q5VYY1 191 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 DARS2Q6PI48 645 aaKnown RBP20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 OSTM1Q86WC4 334 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 CYP4X1Q8N118 509 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ZFP42Q96MM3 310 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ZNF317Q96PQ6 595 aaPredicted RBP20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ZNF670Q9BS34 389 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 GPATCH2LQ9NWQ4 482 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 XPO1O14980 1071 aaKnown RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 AOC2O75106 756 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 TFE3P19532 575 aaPredicted RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 TKTP29401 623 aaKnown RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 ARL4CP56559 192 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 DEFB115Q30KQ5 88 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 SLC9A4Q6AI14 798 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 VSTM1Q6UX27 236 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 CXCL17Q6UXB2 119 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 MICALCLQ6ZW33 695 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 RSPH3Q86UC2 560 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 ZC3H18Q86VM9 953 aaKnown RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 PQLC3Q8N755 202 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 FAF2Q96CS3 445 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 HNRNPABQ99729 332 aaKnown RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 UPF3AQ9H1J1 476 aaKnown RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 ACTL7BQ9Y614 415 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 EXOC1LA0A1B0GW35 172 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 GOLGA8MH3BSY2 632 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 CYB561D2O14569 222 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 APOL1O14791 398 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 CREB1P16220 341 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 DRD4P21917 467 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 QPCTQ16769 361 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 CA9Q16790 459 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 GDF6Q6KF10 455 aaPredicted RBP20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 C1orf228Q6PIY5 440 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 TDRPQ86YL5 185 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 PCDH19Q8TAB3 1148 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 ARHGAP39Q9C0H5 1083 aa20.55■□□□□ 0.88
PCDHB11-202ENST00000624887 TMEM120BA0PK00 339 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 GCAP28676 217 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 HP1BP3Q5SSJ5 553 aaPredicted RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 MFSD14CQ5VZR4 134 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 TRIB2Q92519 343 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 PRMT1Q99873 361 aaKnown RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 ADAM33Q9BZ11 813 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 RASSF4Q9H2L5 321 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 CHST12Q9NRB3 414 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 SLC38A7Q9NVC3 462 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 TBK1Q9UHD2 729 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 DDX20Q9UHI6 824 aaKnown RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 E7ESA3 106 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 H7C0C1 242 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 GABRDO14764 452 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 PGK1P00558 417 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 ATP5OP48047 213 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 BCAR1P56945 870 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 GAD2Q05329 585 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 DPYSL2Q16555 572 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 EFHC1Q5JVL4 640 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 CPLX4Q7Z7G2 160 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 TADA2BQ86TJ2 420 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 CCDC13Q8IYE1 715 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 REM2Q8IYK8 340 aaPredicted RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 FUKQ8N0W3 1084 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 GSTCDQ8NEC7 633 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 MAML1Q92585 1016 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 WNT8BQ93098 351 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 DUSP16Q9BY84 665 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 SENP6Q9GZR1 1112 aaPredicted RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 TSPYL2Q9H2G4 693 aaPredicted RBP20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 VPS37BQ9H9H4 285 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 PPCSQ9HAB8 311 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 USP29Q9HBJ7 922 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 SPC25Q9HBM1 224 aa20.54■□□□□ 0.88
PCDHB11-202ENST00000624887 TCRBV7S3A2A0A539 114 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 MEIS3P2A8K0S8 358 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 TMEM63AO94886 807 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 NKX3-2P78367 333 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 FNBP1LQ5T0N5 605 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 PIGZQ86VD9 579 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 SERINC5Q86VE9 423 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 HACE1Q8IYU2 909 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 RTP4Q96DX8 246 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 CREBZFQ9NS37 354 aa20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 ZMYND8Q9ULU4 1186 aaPredicted RBP20.53■□□□□ 0.88
PCDHB11-202ENST00000624887 CFAP69A5D8W1 941 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 FOXO6A8MYZ6 492 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 ANKRD65E5RJM6 399 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 ATP2C2O75185 946 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 CHRNA1P02708 482 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 BRAFP15056 766 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 PTPN1P18031 435 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms