RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PLD5Q8N7P1 536 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 CPB2Q96IY4 423 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 SRPK1Q96SB4 655 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 CNPY3Q9BT09 278 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 MECRQ9BV79 373 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 BATF3Q9NR55 127 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 FAM237BA0A1B0GVD1 139 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 GAS2O43903 313 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 IL18RAPO95256 599 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 HMGCRP04035 888 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 TSHRP16473 764 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 SERPINB4P48594 390 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 NDST1P52848 882 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 VGLL4Q14135 290 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 TFDP2Q14188 446 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 WASHC2DQ5SRD0 308 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 RNF157Q96PX1 679 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 BTBD10Q9BSF8 475 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
C11orf54-215ENST00000617482 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 TNFSF13BQ9Y275 285 aa12.28□□□□□ -0.44
C11orf54-215ENST00000617482 COPEO14579 308 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 CHADO15335 359 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 GYG2O15488 501 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 UGT1A9O60656 530 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 ENDOD1O94919 500 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 MYL2P10916 166 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 VDRP11473 427 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 IL4RP24394 825 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 ABL2P42684 1182 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 SESN3P58005 492 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 CDK16Q00536 496 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 SLC18A2Q05940 514 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 SPDYAQ5MJ70 313 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 PLPPR4Q7Z2D5 763 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 SLC26A11Q86WA9 606 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 FBXO16Q8IX29 292 aaPredicted RBP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 CXorf38Q8TB03 319 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 PTCD3Q96EY7 689 aaKnown RBP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 NSL1Q96IY1 281 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 MAF1Q9H063 256 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 RNPEPQ9H4A4 650 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 TLE6Q9H808 572 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 IFT122Q9HBG6 1241 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 ZC3H7BQ9UGR2 993 aaKnown RBP12.27□□□□□ -0.44
C11orf54-215ENST00000617482 TSPAN16Q9UKR8 245 aa12.27□□□□□ -0.44
C11orf54-215ENST00000617482 FZD9O00144 591 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 SOCS7O14512 581 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 GSC2O15499 205 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 LGR5O75473 907 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 BMPR2Q13873 1038 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 CA9Q16790 459 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 CCDC14Q49A88 953 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 TTC39BQ5VTQ0 682 aaPredicted RBP12.27□□□□□ -0.45
C11orf54-215ENST00000617482 RINLQ6ZS11 566 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 ALYREFQ86V81 257 aaKnown RBP12.27□□□□□ -0.45
C11orf54-215ENST00000617482 CHSY1Q86X52 802 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 ZNF395Q9H8N7 513 aaPredicted RBP12.27□□□□□ -0.45
C11orf54-215ENST00000617482 PAK5Q9P286 719 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 MTO1Q9Y2Z2 717 aaKnown RBP12.27□□□□□ -0.45
C11orf54-215ENST00000617482 TTLL3Q9Y4R7 772 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 LRRC42Q9Y546 428 aa12.27□□□□□ -0.45
C11orf54-215ENST00000617482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 A0A087WZ62 844 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 KIF1CO43896 1103 aaKnown RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 UPP2O95045 317 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 BCAR1P56945 870 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 SLC10A6Q3KNW5 377 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 PPP6R3Q5H9R7 873 aaPredicted RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 CAND1Q86VP6 1230 aaKnown RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 EXOC8Q8IYI6 725 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 VPS52Q8N1B4 723 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 PQLC3Q8N755 202 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 ENDOVQ8N8Q3 282 aaKnown RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 FDXACB1Q9BRP7 624 aaPredicted RBP12.26□□□□□ -0.45
C11orf54-215ENST00000617482 CNTN3Q9P232 1028 aa12.26□□□□□ -0.45
C11orf54-215ENST00000617482 PPME1Q9Y570 386 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms