RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PDGFRAP16234 1089 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 SDC4P31431 198 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 PSEN1P49768 467 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-212ENST00000601919 IFRD2Q12894 506 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-212ENST00000601919 SDHAF4Q5VUM1 108 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 BEND5Q7L4P6 421 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 MON1AQ86VX9 555 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 NIPA2Q8N8Q9 360 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 KREMEN2Q8NCW0 462 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 KIF18AQ8NI77 898 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 JOSD2Q8TAC2 188 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 PPP2R3CQ969Q6 453 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 SLITRK1Q96PX8 696 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 WDR24Q96S15 920 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 NAPGQ99747 312 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-212ENST00000601919 CNPY3Q9BT09 278 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 PLEKHA4Q9H4M7 779 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 RRN3Q9NYV6 651 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.47■□□□□ 0.71
SSBP4-212ENST00000601919 STAP1Q9ULZ2 295 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 ASB3Q9Y575 518 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 INSL5Q9Y5Q6 135 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
SSBP4-212ENST00000601919 DPYSL4O14531 572 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 SPOPO43791 374 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 RNF8O76064 485 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 ATF6P18850 670 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 NOS2P35228 1153 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 IRS1P35568 1242 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 MATKP42679 507 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 TWF1Q12792 350 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 ELMOD1Q8N336 334 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 EMC1Q8N766 993 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 RXFP2Q8WXD0 754 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSBP4-212ENST00000601919 FBXO32Q969P5 355 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 PIWIL1Q96J94 861 aaKnown RBP19.46■□□□□ 0.71
SSBP4-212ENST00000601919 BTBD6Q96KE9 485 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 TTLL2Q9BWV7 592 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 TRIM7Q9C029 511 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 TMEM51Q9NW97 253 aa19.46■□□□□ 0.71
SSBP4-212ENST00000601919 UXTQ9UBK9 157 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-212ENST00000601919 FAM92AA1XBS5 289 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 YJEFN3A6XGL0 299 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 MIF4GDA9UHW6 222 aaKnown RBP19.45■□□□□ 0.7
SSBP4-212ENST00000601919 E7ENQ6 273 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 CLASP2O75122 1294 aaKnown RBP19.45■□□□□ 0.7
SSBP4-212ENST00000601919 LRG1P02750 347 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 COMTP21964 271 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 FLT3P36888 993 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 PTPN9P43378 593 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 CLCN4P51793 760 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 TAF5Q15542 800 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 LRIT3Q3SXY7 679 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 MEI1Q5TIA1 1274 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 NT5DC3Q86UY8 548 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 PDZD8Q8NEN9 1154 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 SLC7A14Q8TBB6 771 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 GPR152Q8TDT2 470 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 GIPC2Q8TF65 315 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 GDPD5Q8WTR4 605 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 OVCA2Q8WZ82 227 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 SLC2A13Q96QE2 648 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 DDX23Q9BUQ8 820 aaKnown RBP19.45■□□□□ 0.7
SSBP4-212ENST00000601919 TLR8Q9NR97 1041 aaKnown RBP19.45■□□□□ 0.7
SSBP4-212ENST00000601919 ABCC13Q9NSE7 274 aa19.45■□□□□ 0.7
SSBP4-212ENST00000601919 FTCDO95954 541 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 C8AP07357 584 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 PPP3CCP48454 512 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 YWHAGP61981 247 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSBP4-212ENST00000601919 RPS6KA1Q15418 735 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 DCAF6Q58WW2 860 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 BSPRYQ5W0U4 402 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 BTBD8Q5XKL5 378 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 DEFB106AQ8N104 65 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 UBL4BQ8N7F7 174 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 NDRG1Q92597 394 aaKnown RBP19.44■□□□□ 0.7
SSBP4-212ENST00000601919 TRMT2BQ96GJ1 504 aaKnown RBP19.44■□□□□ 0.7
SSBP4-212ENST00000601919 CDCA3Q99618 268 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-212ENST00000601919 TLE6Q9H808 572 aa19.44■□□□□ 0.7
SSBP4-212ENST00000601919 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSBP4-212ENST00000601919 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 SPATA31D3P0C874 917 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 RALAP11233 206 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 NCAM1P13591 858 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 SSR1P43307 286 aaKnown RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 USP46P62068 366 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 OGDHQ02218 1023 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 TAF10Q12962 218 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 HADHQ16836 314 aaKnown RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 SLC25A52Q3SY17 297 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 PPM1LQ5SGD2 360 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 SPATA31D4Q6ZUB0 917 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 BHLHA9Q7RTU4 235 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 RNF139Q8WU17 664 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 PSMG2Q969U7 264 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 MRPL38Q96DV4 380 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms