RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PAPSS1O43252 624 aaPredicted RBP19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 TOMM70O94826 608 aa19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 ZFXP17010 805 aaPredicted RBP19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 GNL1P36915 607 aaPredicted RBP19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 C1orf228Q6PIY5 440 aa19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 ADGRD1Q6QNK2 874 aa19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 NPNTQ6UXI9 565 aa19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 RTP4Q96DX8 246 aa19.97■□□□□ 0.79
PRKCSH-209ENST00000589838 BCLAF3A2AJT9 711 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 ADCY6O43306 1168 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 ASMTLO95671 621 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 KCNE1P15382 129 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 MSH2P43246 934 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 PSEN2P49810 448 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 MAP2K5Q13163 448 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SV2CQ496J9 727 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 MSS51Q4VC12 460 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 FBXW10Q5XX13 1052 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SLC9A4Q6AI14 798 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SLC26A9Q7LBE3 791 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 C7orf31Q8N865 590 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 DENND1AQ8TEH3 1009 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 KHSRPQ92945 711 aaKnown RBP eCLIP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 FAF2Q96CS3 445 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SNRNP25Q9BV90 132 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 CXCL16Q9H2A7 254 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 NXF3Q9H4D5 531 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 HES2Q9Y543 173 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 KPNA7A9QM74 516 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SPAG7O75391 227 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 TMEM63AO94886 807 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 TAC1P20366 129 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SSTR1P30872 391 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 CPT1AP50416 773 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 KCNJ11Q14654 390 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 MTFR1Q15390 333 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 GLRA4Q5JXX5 417 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 MORN1Q5T089 497 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 RGS9BPQ6ZS82 235 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 TLK2Q86UE8 772 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 FBF1Q8TES7 1133 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 DNAJB3Q8WWF6 145 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 ALKBH8Q96BT7 664 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 HSFY1Q96LI6 401 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 CYTH2Q99418 400 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 PAIP2Q9BPZ3 127 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 DHRS4Q9BTZ2 278 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 APOL6Q9BWW8 343 aa19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 PIN4Q9Y237 131 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-209ENST00000589838 SMIM28A0A1B0GU29 152 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 TCRBV7S3A2A0A539 114 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 ATP2C2O75185 946 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 BANF1O75531 89 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 ZWINTO95229 277 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 ZBED1O96006 694 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 IL4RP24394 825 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 RPL34P49207 117 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 TAF6P49848 677 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 WDR4P57081 412 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 ADAM17P78536 824 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 ADCY1Q08828 1119 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 SNX17Q15036 470 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 RAB6CQ53S08 254 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 XKR4Q5GH76 650 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 NME8Q8N427 588 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 APPL2Q8NEU8 664 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 TNIP3Q96KP6 325 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 PTPN18Q99952 460 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 PITPNM3Q9BZ71 974 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 RAB6CQ9H0N0 254 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 USP29Q9HBJ7 922 aa19.95■□□□□ 0.78
PRKCSH-209ENST00000589838 HAS3O00219 553 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 KCNN4O15554 427 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 CA4P22748 312 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 AKAP5P24588 427 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HNRNPH1P31943 449 aaKnown RBP19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 GAD2Q05329 585 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HHATQ5VTY9 493 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 CDKL3Q8IVW4 592 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 PQLC3Q8N755 202 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 PCDH19Q8TAB3 1148 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 CENPIQ92674 756 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 PAFAH2Q99487 392 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 KATNAL1Q9BW62 490 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 KLC2Q9H0B6 622 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 AP5M1Q9H0R1 490 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HAUS2Q9NVX0 235 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 KLHL14Q9P2G3 628 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 SLC12A4Q9UP95 1085 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 NME7Q9Y5B8 376 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 GNAT1P11488 350 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 NR2C2P49116 596 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 CRYBB1P53674 252 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HDAC4P56524 1084 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 XRCC4Q13426 336 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 EFHC1Q5JVL4 640 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 TAB3Q8N5C8 712 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 PRDM16Q9HAZ2 1276 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 SLC40A1Q9NP59 571 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms