RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 MSS51Q4VC12 460 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 SLC9A4Q6AI14 798 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 TWF2Q6IBS0 349 aaKnown RBP20.34■□□□□ 0.85
CDH5-204ENST00000563425 C1orf228Q6PIY5 440 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 SRRM1Q8IYB3 904 aaKnown RBP20.34■□□□□ 0.85
CDH5-204ENST00000563425 LRRC34Q8IZ02 419 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 ADGRF2Q8IZF7 708 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 TOP6BLQ8N6T0 577 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 SLC2A14Q8TDB8 520 aa20.34■□□□□ 0.85
CDH5-204ENST00000563425 ZMYND8Q9ULU4 1186 aaPredicted RBP20.34■□□□□ 0.85
CDH5-204ENST00000563425 ZNF638Q14966 1978 aaKnown RBP20.34■□□□□ 0.85
CDH5-204ENST00000563425 TCRBV7S3A2A0A539 114 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
CDH5-204ENST00000563425 BANF1O75531 89 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 TMEM63AO94886 807 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 TFE3P19532 575 aaPredicted RBP20.33■□□□□ 0.85
CDH5-204ENST00000563425 GPX6P59796 221 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 TMED2Q15363 201 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 ANKMY2Q8IV38 441 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 PCDH19Q8TAB3 1148 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 FAF2Q96CS3 445 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 CABS1Q96KC9 395 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 TNIP3Q96KP6 325 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 HSFY1Q96LI6 401 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 ZNF670Q9BS34 389 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 RASSF4Q9H2L5 321 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 UBN1Q9NPG3 1134 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 CLUHO75153 1309 aa20.33■□□□□ 0.85
CDH5-204ENST00000563425 MYADML2A6NDP7 307 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 RASA4BC9J798 803 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 H7C0C1 242 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 PTGESO14684 152 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 APOL1O14791 398 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 RASA4O43374 803 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 KPNA6O60684 536 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.84
CDH5-204ENST00000563425 LCP1P13796 627 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 ATP5OP48047 213 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 LRRC14Q15048 493 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 RASA2Q15283 850 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 PIGWQ7Z7B1 504 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 OSTM1Q86WC4 334 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 MGARPQ8TDB4 240 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 PYROXD1Q8WU10 500 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 DYDC1Q8WWB3 177 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 PPP1R10Q96QC0 940 aaKnown RBP20.33■□□□□ 0.84
CDH5-204ENST00000563425 ADAM33Q9BZ11 813 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 USP29Q9HBJ7 922 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 SLC24A2Q9UI40 661 aa20.33■□□□□ 0.84
CDH5-204ENST00000563425 XPO7Q9UIA9 1087 aaKnown RBP20.33■□□□□ 0.84
CDH5-204ENST00000563425 POC1B-GALNT4F8VUJ3 575 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 NRLP54845 237 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 BCAR1P56945 870 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 BASP1P80723 227 aaKnown RBP20.32■□□□□ 0.84
CDH5-204ENST00000563425 MRPS6P82932 125 aaKnown RBP20.32■□□□□ 0.84
CDH5-204ENST00000563425 CAPN12Q6ZSI9 719 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 TRABD2AQ86V40 505 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 TAB3Q8N5C8 712 aaPredicted RBP20.32■□□□□ 0.84
CDH5-204ENST00000563425 ANKRD42Q8N9B4 389 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 ATP11CQ8NB49 1132 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 B3GALNT2Q8NCR0 500 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 TRPV1Q8NER1 839 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 RTP4Q96DX8 246 aa20.32■□□□□ 0.84
CDH5-204ENST00000563425 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 TKTP29401 623 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 INHBEP58166 350 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 DPYSL2Q16555 572 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 EFHC2Q5JST6 749 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 RGMBQ6NW40 437 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 PDIK1LQ8N165 341 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 PPM1EQ8WY54 764 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 HNRNPABQ99729 332 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 WDR83Q9BRX9 315 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 ZFYVE28Q9HCC9 887 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 FETUBQ9UGM5 382 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 RABGEF1Q9UJ41 708 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 CFAP69A5D8W1 941 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 XPO1O14980 1071 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 VIMP08670 466 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 FAM163BP0C2L3 166 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 L1CAMP32004 1257 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 PHBP35232 272 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 RNASELQ05823 741 aaKnown RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 RNF187Q5TA31 235 aaPredicted RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 CKAP2Q8WWK9 683 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 MTG1Q9BT17 334 aaPredicted RBP20.31■□□□□ 0.84
CDH5-204ENST00000563425 HEY1Q9Y5J3 304 aa20.31■□□□□ 0.84
CDH5-204ENST00000563425 TSC2P49815 1807 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 BCLAF3A2AJT9 711 aaKnown RBP20.3■□□□□ 0.84
CDH5-204ENST00000563425 TSHRP16473 764 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 CTGFP29279 349 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 KCNJ11Q14654 390 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 PPP6R3Q5H9R7 873 aaPredicted RBP20.3■□□□□ 0.84
CDH5-204ENST00000563425 EFHC1Q5JVL4 640 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 ARHGEF18Q6ZSZ5 1173 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 FUKQ8N0W3 1084 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 CCDC197Q8NCU1 140 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 FBXO36Q8NEA4 188 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 ZFP42Q96MM3 310 aa20.3■□□□□ 0.84
CDH5-204ENST00000563425 DUSP16Q9BY84 665 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms