RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 OR8K1Q8NGG5 319 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 IRGQQ8WZA9 623 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 ZSWIM3Q96MP5 696 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 SLC46A2Q9BY10 475 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 TRPC7Q9HCX4 862 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 OSER1Q9NX31 292 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 CHORDC1Q9UHD1 332 aaPredicted RBP22.78■■□□□ 1.24
SNX1-206ENST00000559389 BZW2Q9Y6E2 419 aaKnown RBP22.78■■□□□ 1.24
SNX1-206ENST00000559389 HELZP42694 1942 aaKnown RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 C19orf67A6NJJ6 358 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 AKR1B15C9JRZ8 316 aaPredicted RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 PAPSS1O43252 624 aaPredicted RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 PSEN1P49768 467 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 CENPCQ03188 943 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 ARHGAP18Q8N392 663 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 PLCD3Q8N3E9 789 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 MAB21L3Q8N8X9 362 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 ZSCAN18Q8TBC5 510 aaPredicted RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 CLEC4CQ8WTT0 213 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 NDRG1Q92597 394 aaKnown RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 ASB16Q96NS5 453 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 MIS12Q9H081 205 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 SEPT11Q9NVA2 429 aaKnown RBP22.77■■□□□ 1.24
SNX1-206ENST00000559389 CLIC5Q9NZA1 410 aa22.77■■□□□ 1.24
SNX1-206ENST00000559389 TRAV19A0A0A6YYK7 116 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 YJEFN3A6XGL0 299 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 E7ENQ6 273 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 SART1O43290 800 aaKnown RBP22.76■■□□□ 1.23
SNX1-206ENST00000559389 ABL1P00519 1130 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 FCARP24071 287 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 WEE1P30291 646 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 ADKP55263 362 aaKnown RBP22.76■■□□□ 1.23
SNX1-206ENST00000559389 YWHAGP61981 247 aaKnown RBP eCLIP22.76■■□□□ 1.23
SNX1-206ENST00000559389 FAM78AQ5JUQ0 283 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 WDR59Q6PJI9 974 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 CMTM8Q8IZV2 173 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 MSANTD4Q8NCY6 345 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 CPA5Q8WXQ8 436 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 TRPV4Q9HBA0 871 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 ARHGAP20Q9P2F6 1191 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 NAGPAQ9UK23 515 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 XIRP2A4UGR9 3374 aa22.76■■□□□ 1.23
SNX1-206ENST00000559389 FAM170AA1A519 330 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 ANHXE9PGG2 379 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 DDX3XO00571 662 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX1-206ENST00000559389 TLR5O60602 858 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 PRAMEF12O95522 483 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 PLEKP08567 350 aaPredicted RBP22.75■■□□□ 1.23
SNX1-206ENST00000559389 TNFAIP3P21580 790 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 MMP8P22894 467 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 GABRB2P47870 512 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 SNX16P57768 344 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 HTR4Q13639 388 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 HECTD3Q5T447 861 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 OLFML1Q6UWY5 402 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 FAM183BPQ6ZVS7 135 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 SCUBE3Q8IX30 993 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 TC2NQ8N9U0 490 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 SMARCD2Q92925 531 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 PIWIL1Q96J94 861 aaKnown RBP22.75■■□□□ 1.23
SNX1-206ENST00000559389 SLC22A12Q96S37 553 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 SYNCQ9H7C4 482 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 CCSER2Q9H7U1 834 aa22.75■■□□□ 1.23
SNX1-206ENST00000559389 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX1-206ENST00000559389 TCF20Q9UGU0 1960 aaKnown RBP22.75■■□□□ 1.23
SNX1-206ENST00000559389 COCHO43405 550 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 CKMP06732 381 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 NSFP46459 744 aaKnown RBP22.74■■□□□ 1.23
SNX1-206ENST00000559389 MMS22LQ6ZRQ5 1243 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 HFE2Q6ZVN8 426 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 MTSS1LQ765P7 747 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 ERICH1Q86X53 443 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 PHF13Q86YI8 300 aaPredicted RBP22.74■■□□□ 1.23
SNX1-206ENST00000559389 ARL14EPQ8N8R7 260 aaPredicted RBP22.74■■□□□ 1.23
SNX1-206ENST00000559389 SLC30A5Q8TAD4 765 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 ADAMTS19Q8TE59 1207 aa22.74■■□□□ 1.23
SNX1-206ENST00000559389 ZNHIT6Q9NWK9 470 aaKnown RBP22.74■■□□□ 1.23
SNX1-206ENST00000559389 LTFP02788 710 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 RALAP11233 206 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 RARGP13631 454 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 AVPR1AP37288 418 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 PTP4A2Q12974 167 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 BSPRYQ5W0U4 402 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 PARM1Q6UWI2 310 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 MON1BQ7L1V2 547 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 ZDHHC17Q8IUH5 632 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 ARID3BQ8IVW6 561 aaPredicted RBP22.73■■□□□ 1.23
SNX1-206ENST00000559389 ZNF276Q8N554 614 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 C18orf8Q96DM3 657 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 C11orf70Q9BRQ4 267 aa22.73■■□□□ 1.23
SNX1-206ENST00000559389 SMG9Q9H0W8 520 aaKnown RBP22.73■■□□□ 1.23
SNX1-206ENST00000559389 KIF26AQ9ULI4 1882 aaPredicted RBP22.73■■□□□ 1.23
SNX1-206ENST00000559389 HDCP19113 662 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 SCNN1AP37088 669 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 SLC7A9P82251 487 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 ZNF268Q14587 947 aaPredicted RBP22.72■■□□□ 1.23
SNX1-206ENST00000559389 TSR1Q2NL82 804 aaKnown RBP22.72■■□□□ 1.23
SNX1-206ENST00000559389 C2CD6Q53TS8 623 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms