RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NDUFAF1Q9Y375 327 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SLCO1B7G3V0H7 640 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 POLR2EP19388 210 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 UBE2J2Q8N2K1 259 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 EIF2AK1Q9BQI3 630 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PLCL2Q9UPR0 1127 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 C9IYK1 514 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FARP2O94887 1054 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 GJA9P57773 515 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SURF1Q15526 300 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PKN1Q16512 942 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TTC30BQ8N4P2 665 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC17Q96LX7 622 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SRPK1Q96SB4 655 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 DUSP9Q99956 384 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PSMC3IPQ9P2W1 217 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 LNPEPQ9UIQ6 1025 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 C2orf71A6NGG8 1288 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RHOBTB3O94955 611 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CCNYL2Q5T2Q4 361 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 DNAJC11Q9NVH1 559 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TOR1BO14657 336 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CENPCQ03188 943 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RFWD3Q6PCD5 774 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HS6ST3Q8IZP7 471 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZFP28Q8NHY6 868 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TAS2R1Q9NYW7 299 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TRPM5Q9NZQ8 1165 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UBE2SQ16763 222 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 FBXO25Q8TCJ0 367 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HSPBAP1Q96EW2 488 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ELMO2Q96JJ3 720 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF717Q9BY31 904 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 AASDHPPTQ9NRN7 309 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 FADS3Q9Y5Q0 445 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 POLRMTO00411 1230 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 IFNA14P01570 189 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZYXQ15942 572 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 IRF2BP2Q7Z5L9 587 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CLHC1Q8NHS4 586 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LPGAT1Q92604 370 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PRKACAP17612 351 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 NME3Q13232 169 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ANKRD23Q86SG2 305 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ULK2Q8IYT8 1036 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 FBXO36Q8NEA4 188 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SCFD1Q8WVM8 642 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SNX27Q96L92 541 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CASS4Q9NQ75 786 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 FYNP06241 537 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 BHLHB9Q6PI77 547 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RP9Q8TA86 221 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MRPL9Q9BYD2 267 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 UVRAGQ9P2Y5 699 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CRTAMO95727 393 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 EIF3MQ7L2H7 374 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 THAP5Q7Z6K1 395 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CEP95Q96GE4 821 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SLC12A4Q9UP95 1085 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CLEC11AQ9Y240 323 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ATP12AP54707 1039 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 DNASE1L3Q13609 305 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZCCHC8Q6NZY4 707 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 SESN1Q9Y6P5 492 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 NFIL3Q16649 462 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 DOK7Q18PE1 504 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 BROXQ5VW32 411 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 OTOAQ7RTW8 1153 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 C11orf74Q86VG3 221 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 EPHX4Q8IUS5 362 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TP53INP1Q96A56 240 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ABLIM1O14639 778 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 GRAP2O75791 330 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LTFP02788 710 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 RBP1P09455 135 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 NR4A1P22736 598 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TTC23Q5W5X9 447 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PRR23BQ6ZRT6 265 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TMC3Q7Z5M5 1100 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 STRA8Q7Z7C7 330 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZDHHC13Q8IUH4 622 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MIER2Q8N344 545 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 GPRASP2Q96D09 838 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM109Q9BVC6 243 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MED28Q9H204 178 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ING3Q9NXR8 418 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 GPRC5DQ9NZD1 345 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 A0A0G2JPF8 293 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HNRNPCL3B7ZW38 293 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 E7ENX8 843 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 F8W8V4 182 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 INO80B-WBP1J3KQ70 363 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HNRNPCL4P0DMR1 293 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 IMPG1Q17R60 797 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC8DQ7L1W4 858 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 KRT74Q7RTS7 529 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 PHC2Q8IXK0 858 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms