RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 MKI67P46013 3256 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 ITGAVP06756 1048 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 GSTA2P09210 222 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 RBP3P10745 1247 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 ACO1P21399 889 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 BST1Q10588 318 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 UBAP2LQ14157 1087 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 LRRC23Q53EV4 343 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 ABHD15Q6UXT9 468 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 TRIM72Q6ZMU5 477 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PCGF5Q86SE9 256 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 FBXO16Q8IX29 292 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 ST6GALNAC4Q9H4F1 302 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PPM1HQ9ULR3 514 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 DRG1Q9Y295 367 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PIK3R2O00459 728 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 STAM2O75886 525 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 RFC1P35251 1148 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 SNRPFP62306 86 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 AP2B1P63010 937 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 TAF5Q15542 800 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 DARS2Q6PI48 645 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 RASSF3Q86WH2 238 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 NUDCD3Q8IVD9 361 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 GSTCDQ8NEC7 633 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 SLC26A7Q8TE54 656 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 GATA6Q92908 595 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PANX3Q96QZ0 392 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 PPP1R16BQ96T49 567 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 GORASP1Q9BQQ3 440 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 TARS2Q9BW92 718 aaKnown RBP12.86□□□□□ -0.35
HDAC7-230ENST00000552960 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
HDAC7-230ENST00000552960 SOCS7O14512 581 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 STK10O94804 968 aaKnown RBP12.85□□□□□ -0.35
HDAC7-230ENST00000552960 TOP3BO95985 862 aaKnown RBP12.85□□□□□ -0.35
HDAC7-230ENST00000552960 MMP8P22894 467 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 MCL1Q07820 350 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 NCOA4Q13772 614 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 PHF13Q86YI8 300 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-230ENST00000552960 TMPRSS6Q8IU80 811 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 ULK2Q8IYT8 1036 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 FBXL18Q96ME1 805 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 PCYT2Q99447 389 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 EXTL3O43909 919 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 TOM1L1O75674 476 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
HDAC7-230ENST00000552960 JAK3P52333 1124 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 GRM1Q13255 1194 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 FAF2Q96CS3 445 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
HDAC7-230ENST00000552960 SLC7A8Q9UHI5 535 aa12.85□□□□□ -0.35
HDAC7-230ENST00000552960 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 F5H423 210 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 H7C0C1 242 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 ATP5OP48047 213 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 RTP1P59025 263 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PPIL2Q13356 520 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 CMPK2Q5EBM0 449 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 E2F7Q96AV8 911 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PDP2Q9P2J9 529 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 CXCL11O14625 94 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PDE5AO76074 875 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 CALB1P05937 261 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 IL1R2P27930 398 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 SERPINB6P35237 376 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 LPCAT4Q643R3 524 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms