RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ARMC3Q5W041 872 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 OLFML2BQ68BL8 750 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 CYP4F22Q6NT55 531 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 TRMT10CQ7L0Y3 403 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 ZNF410Q86VK4 478 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 FAM136AQ96C01 138 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 PIWIL1Q96J94 861 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 NT5C1AQ9BXI3 368 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 ADAMTS10Q9H324 1103 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 PCMTD2Q9NV79 361 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 DLGAP2Q9P1A6 1054 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 KLHL14Q9P2G3 628 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 EIF4E1BA6NMX2 242 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 TCP11X1B4DZS4 312 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 E5RJQ4 531 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 MAP3K13O43283 966 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 CST8O60676 142 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 SLC25A11Q02978 314 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 HIC1Q14526 733 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 KYAT1Q16773 422 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 KCTD6Q8NC69 237 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 INPP5DQ92835 1189 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 CALN1Q9BXU9 219 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 NINJ2Q9NZG7 142 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 LRCH1Q9Y2L9 728 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 RRN3P2A6NIE6 340 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 KLRC2P26717 231 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 MIPP30301 263 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 POLE2P56282 527 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 HUNKP57058 714 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 AUHQ13825 339 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 C15orf59Q2T9L4 293 aaPredicted RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 RFX6Q8HWS3 928 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 NIPA2Q8N8Q9 360 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 MIPOL1Q8TD10 442 aa12.06□□□□□ -0.48
USP35-207ENST00000530546 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 PIN4Q9Y237 131 aaKnown RBP12.06□□□□□ -0.48
USP35-207ENST00000530546 GOLGA8MH3BSY2 632 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ZSCAN9O15535 394 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 GPR32O75388 356 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 TTC4O95801 387 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 KRT7P08729 469 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 PTDSS1P48651 473 aaKnown RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 FAM183BPQ6ZVS7 135 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ARHGAP18Q8N392 663 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ACTL9Q8TC94 416 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 NUDCD1Q96RS6 583 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ROPN1BQ9BZX4 212 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 VRTNQ9H8Y1 702 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ROPN1Q9HAT0 212 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 SAYSD1Q9NPB0 183 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 TRIM33Q9UPN9 1127 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 KAT6AQ92794 2004 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 TREHO43280 583 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 RECQL4O94761 1208 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 PENKP01210 267 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 HMGCRP04035 888 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 PDGFRBP09619 1106 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 KDELR1P24390 212 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 VCPP55072 806 aaKnown RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 CAV1Q03135 178 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 MTM1Q13496 603 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 MFSD10Q14728 455 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 MUM1Q2TAK8 710 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 RNF220Q5VTB9 566 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 SCYL2Q6P3W7 929 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ALLCQ8N6M5 410 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 ZNF513Q8N8E2 541 aaPredicted RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 MGARPQ8TDB4 240 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 TMEM40Q8WWA1 233 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 RXFP2Q8WXD0 754 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 PLEKHG4BQ96PX9 1271 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 RBM15Q96T37 977 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP35-207ENST00000530546 PHF24Q9UPV7 400 aa12.05□□□□□ -0.48
USP35-207ENST00000530546 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.05□□□□□ -0.48
USP35-207ENST00000530546 UNCXA6NJT0 531 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 SH3BGRP55822 239 aaPredicted RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 FKBP1BP68106 108 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 ADCY1Q08828 1119 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 TAF1CQ15572 869 aaPredicted RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 BBOF1Q8ND07 529 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 MCRS1Q96EZ8 462 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 MIS12Q9H081 205 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms