RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 SYNCQ9H7C4 482 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDH12-203ENST00000517378 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 NXF1Q9UBU9 619 aaKnown RBP6.94□□□□□ -1.3
CDH12-203ENST00000517378 PCSK1NQ9UHG2 260 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 PLLPQ9Y342 182 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 LTBP3Q9NS15 1303 aa6.94□□□□□ -1.3
CDH12-203ENST00000517378 M0QYV0 167 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 NFKBIEO00221 500 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MAGEC1O60732 1142 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 SNNO75324 88 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 KRT37O76014 449 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 NFICP08651 508 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 SNRPAP09012 282 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 CXCL8P10145 99 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 BGNP21810 368 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 IL4RP24394 825 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 VHLP40337 213 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 HIRAP54198 1017 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 CDH6P55285 790 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MRPS5P82675 430 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 GRIK3Q13003 919 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MMRN1Q13201 1228 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 LBRQ14739 615 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 TBCCQ15814 346 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 FAM102AQ5T9C2 384 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 CDHR3Q6ZTQ4 885 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 CAND1Q86VP6 1230 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 IFNLR1Q8IU57 520 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 TTC39CQ8N584 583 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PLD5Q8N7P1 536 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 CEP120Q8N960 986 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 DNAJC9Q8WXX5 260 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 TBCBQ99426 244 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 OSBPL1AQ9BXW6 950 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 RPF1Q9H9Y2 349 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 FBXO6Q9NRD1 293 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 GTF2IRD1Q9UHL9 959 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 SCN4AP35499 1836 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 FAM159BA6NKW6 160 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 FCHO1O14526 889 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 COPEO14579 308 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MDM4O15151 490 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 BIRC5O15392 142 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 GYG2O15488 501 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 B4GALT5O43286 388 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 RFPL1O75677 317 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MCF2P10911 925 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 MYL2P10916 166 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 P4HA1P13674 534 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 NRLP54845 237 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 CDH8P55286 799 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 YWHAGP61981 247 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDH12-203ENST00000517378 KYAT1Q16773 422 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 ACSBG2Q5FVE4 666 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 EEF1DP3Q658K8 133 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 CCDC62Q6P9F0 684 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 LCLAT1Q6UWP7 414 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 TIFABQ6ZNK6 161 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PAXIP1Q6ZW49 1069 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 CYS1Q717R9 158 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 ZNF534Q76KX8 674 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PRPF39Q86UA1 669 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 MAP7D3Q8IWC1 876 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 LMNTD2Q8IXW0 634 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PQLC3Q8N755 202 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PRR11Q96HE9 360 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 SIKE1Q9BRV8 207 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 ZNF670Q9BS34 389 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 ASB7Q9H672 318 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 GBA2Q9HCG7 927 aaPredicted RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 RAB6BQ9NRW1 208 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 NMRK1Q9NWW6 199 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 TAS2R1Q9NYW7 299 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 PIM2Q9P1W9 311 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 STX18Q9P2W9 335 aaKnown RBP6.93□□□□□ -1.3
CDH12-203ENST00000517378 KIAA1257Q9ULG3 409 aa6.93□□□□□ -1.3
CDH12-203ENST00000517378 SLC15A5A6NIM6 579 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 TRIM49D1C9J1S8 452 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 E5RJQ4 531 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 F8W8V4 182 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 FZD9O00144 591 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 APOL1O14791 398 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 NVLO15381 856 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 APOEP02649 317 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PFKMP08237 780 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LINGO3P0C6S8 592 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 TPSB2P20231 275 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CYP3A5P20815 502 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 OSBPP22059 807 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 TNFAIP2Q03169 654 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 STILQ15468 1287 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 TPSAB1Q15661 275 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 AMHR2Q16671 573 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 PKDCCQ504Y2 493 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms