RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FSTL1Q12841 308 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PLS1Q14651 629 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 MLC1Q15049 377 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 IQCB1Q15051 598 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ANO6Q4KMQ2 910 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ARHGAP29Q52LW3 1261 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 LAYNQ6UX15 382 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 Q6YL49 198 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 SPATA21Q7Z572 469 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 UBE2Q1Q7Z7E8 422 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 USP37Q86T82 979 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 LDLRAD3Q86YD5 345 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 TPH2Q8IWU9 490 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 RNF168Q8IYW5 571 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 LNX2Q8N448 690 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 MAGEB6Q8N7X4 407 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 TMIEQ8NEW7 156 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 CAGE1Q8TC20 777 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 EVI5LQ96CN4 794 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 SUCLG2Q96I99 432 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PGBD1Q96JS3 809 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 THUMPD2Q9BTF0 503 aaKnown RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 UNKLQ9H9P5 680 aaKnown RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PRDM11Q9NQV5 511 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ARGLU1Q9NWB6 273 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 QPCTLQ9NXS2 382 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 TUBA8Q9NY65 449 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 CLIP2Q9UDT6 1046 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 NOB1Q9ULX3 412 aaKnown RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 BARX2Q9UMQ3 279 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PLEKHM1Q9Y4G2 1056 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PCDHA1Q9Y5I3 950 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 IKBKGQ9Y6K9 419 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 EVC2Q86UK5 1308 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PLEKHG1Q9ULL1 1385 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PRAG1Q86YV5 1406 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ERVK-7P63135 1459 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 EFCAB6Q5THR3 1501 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ARHGEF40Q8TER5 1519 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 A0A087WUV0 522 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 F8VZ95 297 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZSCAN9O15535 394 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TSPAN6O43657 245 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 CEP104O60308 925 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 RPS6KA5O75582 802 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 UBXN7O94888 489 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 MATN4O95460 622 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM163BP0C2L3 166 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SRGNP10124 158 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 XBP1P17861 261 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 HTR1BP28222 390 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 PSMD7P51665 324 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 CACNB3P54284 484 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SH3BGRP55822 239 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SOX8P57073 446 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 EIF2B5Q13144 721 aaKnown RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC4A8Q2Y0W8 1093 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TBC1D25Q3MII6 688 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 KBTBD12Q3ZCT8 623 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC152Q4G0S7 254 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TEDDM1Q5T9Z0 273 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM160B1Q5W0V3 765 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SYNE3Q6ZMZ3 975 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 EPM2AIP1Q7L775 607 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF627Q7L945 461 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SRGAP1Q7Z6B7 1085 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 WDR63Q8IWG1 891 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC65Q8IXS2 484 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 B3GALNT2Q8NCR0 500 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 RSPH1Q8WYR4 309 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 EXOC4Q96A65 974 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TMEM125Q96AQ2 219 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM81BQ96LP2 452 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TAAR9Q96RI9 348 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TESK2Q96S53 571 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SENP7Q9BQF6 1050 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 AIFM2Q9BRQ8 373 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 C1orf43Q9BWL3 253 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TLR10Q9BXR5 811 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TINAGL1Q9GZM7 467 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 BATF3Q9NR55 127 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF446Q9NWS9 450 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZSCAN32Q9NX65 697 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 HSFX1Q9UBD0 423 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 RAD54BQ9Y620 910 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 MAST3O60307 1309 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 PLEKHH1Q9ULM0 1364 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 NCOA3Q9Y6Q9 1424 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 SPATA31D1Q6ZQQ2 1576 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 TSPOAP1O95153 1857 aa5.11□□□□□ -1.59
HMGB3P13-201ENST00000511263 A0A0B4J269 797 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 CAPN8A6NHC0 703 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 A2ML1A8K2U0 1454 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 F5H697 171 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 PHGDHO43175 533 aaKnown RBP5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ALDH2P05091 517 aa5.1□□□□□ -1.59
HMGB3P13-201ENST00000511263 ATXN1LP0C7T5 689 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms