RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 A0A1W2PQH9 124 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 PAPSS1O43252 624 aaPredicted RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 SART1O43290 800 aaKnown RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 SLC34A2O95436 690 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 OLFM2O95897 454 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 OAS1P00973 400 aaKnown RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 TNFAIP3P21580 790 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 SP100P23497 879 aaPredicted RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 GABRB2P47870 512 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 TUBP50607 506 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 SNX16P57768 344 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 GOLGA8FQ08AF8 430 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 GOLGA8DPQ0D2H9 430 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 TDRD12Q587J7 1177 aaKnown RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 TXNDC8Q6A555 127 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 WDR59Q6PJI9 974 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 TC2NQ8N9U0 490 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 CPA5Q8WXQ8 436 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 ZSWIM3Q96MP5 696 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 SLC46A2Q9BY10 475 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 MIS12Q9H081 205 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 CLIC5Q9NZA1 410 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 ARHGAP20Q9P2F6 1191 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 CHORDC1Q9UHD1 332 aaPredicted RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
USP11-212ENST00000497179 DOCK8Q8NF50 2099 aa15.18■□□□□ 0.02
USP11-212ENST00000497179 TRAV19A0A0A6YYK7 116 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 YJEFN3A6XGL0 299 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 E7ENQ6 273 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ERBB2P04626 1255 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 MMP8P22894 467 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 YWHAGP61981 247 aaKnown RBP eCLIP15.17■□□□□ 0.02
USP11-212ENST00000497179 HECTD3Q5T447 861 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ERICH1Q86X53 443 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
USP11-212ENST00000497179 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ZNF276Q8N554 614 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 MAB21L3Q8N8X9 362 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
USP11-212ENST00000497179 CLEC4CQ8WTT0 213 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 NDRG1Q92597 394 aaKnown RBP15.17■□□□□ 0.02
USP11-212ENST00000497179 SMARCD2Q92925 531 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ASB16Q96NS5 453 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 SYNCQ9H7C4 482 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 TRPV4Q9HBA0 871 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 TRPC7Q9HCX4 862 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
USP11-212ENST00000497179 ZNHIT6Q9NWK9 470 aaKnown RBP15.17■□□□□ 0.02
USP11-212ENST00000497179 OSER1Q9NX31 292 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 NAGPAQ9UK23 515 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ANAPC1Q9H1A4 1944 aa15.17■□□□□ 0.02
USP11-212ENST00000497179 ANHXE9PGG2 379 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 DDX3XO00571 662 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP11-212ENST00000497179 TLR5O60602 858 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 ABL1P00519 1130 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 CKMP06732 381 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 PLEKP08567 350 aaPredicted RBP15.16■□□□□ 0.02
USP11-212ENST00000497179 RARGP13631 454 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 FCARP24071 287 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 NSFP46459 744 aaKnown RBP15.16■□□□□ 0.02
USP11-212ENST00000497179 HTR4Q13639 388 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 ZNF268Q14587 947 aaPredicted RBP15.16■□□□□ 0.02
USP11-212ENST00000497179 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
USP11-212ENST00000497179 FAM78AQ5JUQ0 283 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 FAM183BPQ6ZVS7 135 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 MTSS1LQ765P7 747 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 VPS36Q86VN1 386 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 XYLT1Q86Y38 959 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 CMTM8Q8IZV2 173 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 SLC30A5Q8TAD4 765 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 C18orf8Q96DM3 657 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 SLC22A12Q96S37 553 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 CDK5RAP1Q96SZ6 601 aaKnown RBP15.16■□□□□ 0.02
USP11-212ENST00000497179 CCSER2Q9H7U1 834 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 ASNSD1Q9NWL6 643 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
USP11-212ENST00000497179 COCHO43405 550 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 PRAMEF12O95522 483 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 LTFP02788 710 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 GLI1P08151 1106 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 RALAP11233 206 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 GZMAP12544 262 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 HDCP19113 662 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 SCNN1AP37088 669 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 AVPR1AP37288 418 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 MRE11P49959 708 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 SLC7A9P82251 487 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 CDK17Q00537 523 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 PTP4A2Q12974 167 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
USP11-212ENST00000497179 BSPRYQ5W0U4 402 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 BTBD8Q5XKL5 378 aa15.15■□□□□ 0.02
USP11-212ENST00000497179 OR6B2Q6IFH4 312 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms