RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SIMC1Q8NDZ2 872 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 MBD3L2Q8NHZ7 208 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-213ENST00000484088 SUN3Q8TAQ9 357 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 GLG1Q92896 1179 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 ZNF764Q96H86 408 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-213ENST00000484088 Q96MF0 132 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 HAPLN3Q96S86 360 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 PSMD1Q99460 953 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 C17orf80Q9BSJ5 609 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 KATNAL1Q9BW62 490 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 TMEM120AQ9BXJ8 343 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.73□□□□□ -1.97
ITGB1-213ENST00000484088 SLC25A32Q9H2D1 315 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 MYH16Q9H6N6 1097 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 ZBTB26Q9HCK0 441 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 LUZP4Q9P127 313 aa2.73□□□□□ -1.97
ITGB1-213ENST00000484088 MORC2Q9Y6X9 1032 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-213ENST00000484088 GXYLT2A0PJZ3 443 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 A1L4Q6 167 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A18PA6NE21 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A16PA6NEW6 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A9PA6NNJ1 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A5PA8MXJ8 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 M0QZQ0 153 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 IPO5O00410 1097 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PIP5K1BO14986 540 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 MPPED1O15442 326 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 SPRY2O43597 315 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ASNA1O43681 348 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 TJP3O95049 919 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 RASAL1O95294 804 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FGAP02671 866 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 HLA-DOAP06340 250 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A15PP0C7V4 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A14PP0C7W9 464 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ITGAMP11215 1152 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 MCM5P33992 734 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FOLR3P41439 243 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 GRK6P43250 576 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 CLCN2P51788 898 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PGDP52209 483 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ICA1Q05084 483 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ITIH3Q06033 890 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 BLMHQ13867 455 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ACOX1Q15067 660 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PTPAQ15257 358 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 TRIM71Q2Q1W2 868 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 SPDYE7PQ495Y7 208 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PREPLQ4J6C6 727 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 CCDC38Q502W7 563 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 GORABQ5T7V8 394 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAXCQ5TGI0 409 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 FAM90A2PQ658T7 463 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 GRHL2Q6ISB3 625 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 GGT6Q6P531 493 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 LAYNQ6UX15 382 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 MYCT1Q8N699 235 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ATG16L2Q8NAA4 619 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 IPCEF1Q8WWN9 437 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 MUL1Q969V5 352 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 RSPRY1Q96DX4 576 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PTCD3Q96EY7 689 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 KAZALD1Q96I82 304 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PDLIM2Q96JY6 352 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 HERPUD2Q9BSE4 406 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 THAP7Q9BT49 309 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 DDX23Q9BUQ8 820 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 VN1R3Q9BXE9 311 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 TPSD1Q9BZJ3 242 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 TP63Q9H3D4 680 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 MLXIPQ9HAP2 919 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 PRDM8Q9NQV8 689 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 KLC4Q9NSK0 619 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 DNAJB11Q9UBS4 358 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 SRP68Q9UHB9 627 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 DRG1Q9Y295 367 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 SLC27A6Q9Y2P4 619 aa2.72□□□□□ -1.97
ITGB1-213ENST00000484088 SETD1BQ9UPS6 1966 aaKnown RBP2.72□□□□□ -1.97
ITGB1-213ENST00000484088 ARID4BQ4LE39 1312 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 WIPF3A6NGB9 483 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 CGB1A6NKQ9 187 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 ZNF213O14771 459 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 YY2O15391 372 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 TAF5LO75529 589 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 SKAP2O75563 359 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 FAM155BO75949 473 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 GLP2RO95838 553 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 MBPP02686 304 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 ANXA6P08133 673 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 CYP21A2P08686 494 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 KLRK1P26718 216 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 CTGFP29279 349 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 GATMP50440 423 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 PROK1P58294 105 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 NXPH1P58417 271 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 SIM1P81133 766 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 PSG6Q00889 435 aa2.71□□□□□ -1.98
ITGB1-213ENST00000484088 NSUN2Q08J23 767 aaKnown RBP eCLIP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 EIF2B5Q13144 721 aaKnown RBP2.71□□□□□ -1.98
ITGB1-213ENST00000484088 GRM4Q14833 912 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms