RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 ARSAP15289 507 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 PTMSP20962 102 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 GNA15P30679 374 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 IFNAR2P48551 515 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 PSEN1P49768 467 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 NUBP1P53384 320 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 MLLT6P55198 1093 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 PDGFRLQ15198 375 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 ITPRIPL2Q3MIP1 535 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 C1orf228Q6PIY5 440 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 DDX42Q86XP3 938 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 TTC8Q8TAM2 541 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 UBA3Q8TBC4 463 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 NACA2Q9H009 215 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 C8orf33Q9H7E9 229 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 GKN1Q9NS71 199 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 FANCLQ9NW38 375 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 DUS2Q9NX74 493 aaKnown RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 NAGPAQ9UK23 515 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 NDRG2Q9UN36 371 aaKnown RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
COL5A1-206ENST00000465877 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 MAN2B1O00754 1011 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 TPM2P07951 284 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 GLULP15104 373 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 TKTL1P51854 596 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 RUNX3Q13761 415 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 NCAPHQ15003 741 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 EML3Q32P44 896 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 TXNDC11Q6PKC3 985 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 RALGPS2Q86X27 583 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 FAM3CQ92520 227 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 ATP2A3Q93084 1043 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 PRRX2Q99811 253 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 OSBPL6Q9BZF3 934 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 ULBP1Q9BZM6 244 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 UBXN6Q9BZV1 441 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 NAT10Q9H0A0 1025 aaKnown RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 VPS16Q9H269 839 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 ACP6Q9NPH0 428 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 CFAP97Q9P2B7 532 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-206ENST00000465877 FHOD1Q9Y613 1164 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 CACNA1HO95180 2353 aa13.57□□□□□ -0.24
COL5A1-206ENST00000465877 OTOL1A6NHN0 477 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-206ENST00000465877 MDM4O15151 490 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 THAP12O43422 761 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-206ENST00000465877 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-206ENST00000465877 IRF1P10914 325 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 RARGP13631 454 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 ZNF18P17022 549 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 USP8P40818 1118 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 KCNMA1Q12791 1236 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 CNGA2Q16280 664 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 MEA1Q16626 185 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 DPY19L2P1Q6NXN4 242 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 SCD5Q86SK9 330 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 DTWD2Q8NBA8 298 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 KCTD13Q8WZ19 329 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 CHFRQ96EP1 664 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 DNAJC12Q9UKB3 198 aa13.56□□□□□ -0.24
COL5A1-206ENST00000465877 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-206ENST00000465877 SYCE3A1L190 88 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 MED7O43513 233 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 NFATC1O95644 943 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 TBX18O95935 607 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 ZBED1O96006 694 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 RALAP11233 206 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
COL5A1-206ENST00000465877 MAGEA9P43362 315 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 RGS7P49802 495 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
COL5A1-206ENST00000465877 PTPN5P54829 565 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL5A1-206ENST00000465877 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 TCF15Q12870 199 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 RAPGEF1Q13905 1077 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms