RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 A8MVJ9 347 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 NPIPB8E9PQR5 432 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ACKR2O00590 384 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PIP5K1BO14986 540 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 RGS10O43665 173 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM155BO75949 473 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 FGAP02671 866 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ANXA6P08133 673 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PECAM1P16284 738 aaPredicted RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 NTSR1P30989 418 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PRKAR1BP31321 381 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CHKAP35790 457 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CDK7P50613 346 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PGDP52209 483 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 POLE2P56282 527 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 TRIM14Q14142 442 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF169Q14929 603 aaPredicted RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 TBCCQ15814 346 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PDCD2Q16342 344 aaPredicted RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 SMN1Q16637 294 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CYP1B1Q16678 543 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CCDC38Q502W7 563 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ARHGAP15Q53QZ3 475 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 TEDDM1Q5T9Z0 273 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 DEPDC1Q5TB30 811 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 LRCH2Q5VUJ6 765 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CCDC174Q6PII3 467 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 MTHFD1LQ6UB35 978 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PCSK4Q6UW60 755 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF627Q7L945 461 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 RP9Q8TA86 221 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 OTUD7AQ8TE49 926 aaPredicted RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 IPO4Q8TEX9 1081 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ABHD5Q8WTS1 349 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 STYXQ8WUJ0 223 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 ATRIPQ8WXE1 791 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 SLC9A6Q92581 669 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 WDYHV1Q96HA8 205 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PBKQ96KB5 322 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 HIST1H2AAQ96QV6 131 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PAAF1Q9BRP4 392 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 DDX23Q9BUQ8 820 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 KATNAL1Q9BW62 490 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CHMP4AQ9BY43 222 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 MAGEH1Q9H213 219 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 SLC25A32Q9H2D1 315 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 TOR3AQ9H497 397 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 PPCSQ9HAB8 311 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 CASS4Q9NQ75 786 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 GAR1Q9NY12 217 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 DLL3Q9NYJ7 618 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 USP22Q9UPT9 525 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 DRG1Q9Y295 367 aaKnown RBP2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 SLC27A6Q9Y2P4 619 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 hCG_1642624A0A1W2PR95 340 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 CCDC151A5D8V7 595 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A18PA6NE21 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A16PA6NEW6 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A9PA6NNJ1 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A5PA8MXJ8 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 KIAA0355O15063 1070 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FOXN1O15353 648 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 SPRY2O43597 315 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 PEX1O43933 1283 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 CCNT2O60583 730 aaKnown RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 NBNO60934 754 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 PMPCBO75439 489 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 TAF5LO75529 589 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF202O95125 648 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 NXPH3O95157 252 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 VNN1O95497 513 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 PRKCBP05771 671 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A15PP0C7V4 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A14PP0C7W9 464 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 ZFXP17010 805 aaPredicted RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 PROZP22891 400 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 RBL1P28749 1068 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 GKP32189 559 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 MCM5P33992 734 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 GRIA3P42263 894 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 RARRES1P49788 294 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 ITGA8P53708 1063 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 MPP3Q13368 585 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 KCNJ12Q14500 433 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 ZRSR2Q15696 482 aaKnown RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 AASDHQ4L235 1098 aaPredicted RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 C4orf46Q504U0 113 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 TREML2Q5T2D2 321 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM90A2PQ658T7 463 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 LIN54Q6MZP7 749 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 JMJD6Q6NYC1 403 aaPredicted RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 GGT6Q6P531 493 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 FBXO38Q6PIJ6 1188 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 LDHAL6AQ6ZMR3 332 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 PARS2Q7L3T8 475 aaKnown RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF551Q7Z340 670 aaPredicted RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 WDR53Q7Z5U6 358 aaPredicted RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 CAND1Q86VP6 1230 aaKnown RBP2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 RAB11FIP4Q86YS3 637 aa2.25□□□□□ -2.05
NUCKS1-202ENST00000464938 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms