RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 CCDC106Q9BWC9 280 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 RAB6BQ9NRW1 208 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 ETAA1Q9NY74 926 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 HMGXB4Q9UGU5 601 aa12.21□□□□□ -0.45
PDZRN3-203ENST00000462146 PCNTO95613 3336 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 I3L4J1 428 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 VWA5AO00534 786 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 TM7SF2O76062 418 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 TFAMQ00059 246 aaKnown RBP12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 CDC16Q13042 620 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 STYK1Q6J9G0 422 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 XYLT1Q86Y38 959 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 TTLL6Q8N841 843 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 GSTCDQ8NEC7 633 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 MMP19Q99542 508 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 TCHPQ9BT92 498 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 USP18Q9UMW8 372 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 PCDHGC3Q9UN70 934 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 EFR3BQ9Y2G0 817 aa12.21□□□□□ -0.46
PDZRN3-203ENST00000462146 RLFQ13129 1914 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 KLF11O14901 512 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ARL2P36404 184 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 C1orf146Q5VVC0 180 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 FAM91A1Q658Y4 838 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 NET1Q7Z628 596 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 POU5F2Q8N7G0 328 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 USP6NLQ92738 828 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ECSITQ9BQ95 431 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 EBF3Q9H4W6 596 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TAGLN3Q9UI15 199 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ANGPTL2Q9UKU9 493 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 HMX2A2RU54 273 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SPECC1L-ADORA2AF8WAN1 911 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 H7C0C1 242 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 RNASEH1O60930 286 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TRUB2O95900 331 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 IL1BP01584 269 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 OATP04181 439 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ATP5OP48047 213 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 CDH6P55285 790 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ACTR3P61158 418 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SLC25A3Q00325 362 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 DSG1Q02413 1049 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ZRSR2Q15696 482 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 CDO1Q16878 200 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 C15orf59Q2T9L4 293 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ZNF699Q32M78 642 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 MROH9Q5TGP6 573 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 MTHFD1LQ6UB35 978 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 RNF111Q6ZNA4 994 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 WDR49Q8IV35 697 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 NUDCD3Q8IVD9 361 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 APLFQ8IW19 511 aaPredicted RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ARHGAP24Q8N264 748 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 MPP5Q8N3R9 675 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 PYDC1Q8WXC3 89 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 LPAR1Q92633 364 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 PIWIL1Q96J94 861 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 RILPQ96NA2 401 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 TRAPPC9Q96Q05 1148 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 ZNF518BQ9C0D4 1074 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 GPATCH2LQ9NWQ4 482 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 SLC17A6Q9P2U8 582 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 HBS1LQ9Y450 684 aaKnown RBP12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 PPME1Q9Y570 386 aa12.2□□□□□ -0.46
PDZRN3-203ENST00000462146 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 KCNN4O15554 427 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 C6orf222P0C671 652 aaPredicted RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 PDE1BQ01064 536 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 CYP4V2Q6ZWL3 525 aaPredicted RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 CAND1Q86VP6 1230 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 CEP120Q8N960 986 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 CMASQ8NFW8 434 aaPredicted RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ZNF302Q9NR11 478 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 NDE1Q9NXR1 346 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms