RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 SCML2Q9UQR0 700 aa19.51■□□□□ 0.71
NUP50-207ENST00000424634 CACNA1AO00555 2505 aa19.51■□□□□ 0.71
NUP50-207ENST00000424634 SPAG17Q6Q759 2223 aa19.51■□□□□ 0.71
NUP50-207ENST00000424634 RALGAPA1Q6GYQ0 2036 aa19.51■□□□□ 0.71
NUP50-207ENST00000424634 SLC16A3O15427 465 aaKnown RBP19.5■□□□□ 0.71
NUP50-207ENST00000424634 STX10O60499 249 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 GADD45BO75293 160 aaPredicted RBP19.5■□□□□ 0.71
NUP50-207ENST00000424634 RAD23BP54727 409 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 LAIR1Q6GTX8 287 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 C12orf40Q86WS4 652 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 ELOA2Q8IYF1 753 aaPredicted RBP19.5■□□□□ 0.71
NUP50-207ENST00000424634 SLC4A11Q8NBS3 891 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 SECISBP2LQ93073 1101 aaKnown RBP19.5■□□□□ 0.71
NUP50-207ENST00000424634 FAXDC2Q96IV6 333 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 TSG101Q99816 390 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 DUSP16Q9BY84 665 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 NMUR1Q9HB89 426 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 TLR8Q9NR97 1041 aaKnown RBP19.5■□□□□ 0.71
NUP50-207ENST00000424634 MAN1B1Q9UKM7 699 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 COQ4Q9Y3A0 265 aa19.5■□□□□ 0.71
NUP50-207ENST00000424634 CYP26A1O43174 497 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 TLR5O60602 858 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 ACO1P21399 889 aaKnown RBP19.49■□□□□ 0.71
NUP50-207ENST00000424634 BMP6P22004 513 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 DCAF17Q5H9S7 520 aaPredicted RBP19.49■□□□□ 0.71
NUP50-207ENST00000424634 LY6G5CQ5SRR4 150 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 TCERG1LQ5VWI1 586 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 SYT13Q7L8C5 426 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 BBS7Q8IWZ6 715 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 CAMKK1Q8N5S9 505 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 USP33Q8TEY7 942 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 HEXIM2Q96MH2 286 aaKnown RBP19.49■□□□□ 0.71
NUP50-207ENST00000424634 HHIPQ96QV1 700 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 KLF16Q9BXK1 252 aaPredicted RBP19.49■□□□□ 0.71
NUP50-207ENST00000424634 PNPLA8Q9NP80 782 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 TBC1D14Q9P2M4 693 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 GMEB2Q9UKD1 530 aa19.49■□□□□ 0.71
NUP50-207ENST00000424634 MYO18AQ92614 2054 aaKnown RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 CCDC163A0A0D9SF12 145 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 GREM1O60565 184 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 RETP07949 1114 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 IRF1P10914 325 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 TRIM21P19474 475 aaKnown RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 KIF11P52732 1056 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 SEC13P55735 322 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 LRRC63Q05C16 580 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 SPEM2Q0P670 501 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 DMC1Q14565 340 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 C2orf27AQ580R0 203 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 SCD5Q86SK9 330 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 FAM160A2Q8N612 972 aaPredicted RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 GPR161Q8N6U8 529 aaKnown RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 SLC35C1Q96A29 364 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 TMEM176AQ96HP8 235 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 DUSP9Q99956 384 aaKnown RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 CYLDQ9NQC7 956 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 ARMCX3Q9UH62 379 aaPredicted RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
NUP50-207ENST00000424634 NUDT5Q9UKK9 219 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 SH3BP1Q9Y3L3 701 aa19.48■□□□□ 0.71
NUP50-207ENST00000424634 A0A0A0MRY4 1105 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 A0A1W2PQH9 124 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 PPP1R3GB7ZBB8 358 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 ADH5P11766 374 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 RSPO4Q2I0M5 234 aaPredicted RBP19.47■□□□□ 0.71
NUP50-207ENST00000424634 CEP68Q76N32 757 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 TMEM25Q86YD3 366 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 GAB3Q8WWW8 586 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 DHTKD1Q96HY7 919 aaPredicted RBP19.47■□□□□ 0.71
NUP50-207ENST00000424634 PNKPQ96T60 521 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 GTPBP4Q9BZE4 634 aaKnown RBP19.47■□□□□ 0.71
NUP50-207ENST00000424634 NACA2Q9H009 215 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 DLL3Q9NYJ7 618 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 USP3Q9Y6I4 520 aa19.47■□□□□ 0.71
NUP50-207ENST00000424634 MDM4O15151 490 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 ADH1CP00326 375 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 RARGP13631 454 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 ATP5C1P36542 298 aaKnown RBP19.46■□□□□ 0.71
NUP50-207ENST00000424634 EMC10Q5UCC4 262 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 HTR3DQ70Z44 454 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 PHTF2Q8N3S3 785 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 TTC39CQ8N584 583 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 OTUB2Q96DC9 234 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.46■□□□□ 0.71
NUP50-207ENST00000424634 USP18Q9UMW8 372 aa19.46■□□□□ 0.71
NUP50-207ENST00000424634 PSMA7O14818 248 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 AXIN1O15169 862 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 RPP40O75818 363 aaKnown RBP19.45■□□□□ 0.7
NUP50-207ENST00000424634 KAT7O95251 611 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 EIF2DP41214 584 aaKnown RBP19.45■□□□□ 0.7
NUP50-207ENST00000424634 GAD2Q05329 585 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 CUL2Q13617 745 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 ARHGAP17Q68EM7 881 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 TTI2Q6NXR4 508 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 CCDC186Q7Z3E2 898 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.45■□□□□ 0.7
NUP50-207ENST00000424634 KBTBD6Q86V97 674 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 ETFBKMTQ8IXQ9 262 aa19.45■□□□□ 0.7
NUP50-207ENST00000424634 CCDC33Q8N5R6 958 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms