RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 WWP1Q9H0M0 922 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 OLAHQ9NV23 265 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 GID8Q9NWU2 228 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 APEX2Q9UBZ4 518 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 UBR2Q8IWV8 1755 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 NELFEP18615 380 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 BST1Q10588 318 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 NFIXQ14938 502 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HYIQ5T013 277 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 CDHR3Q6ZTQ4 885 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 GPBP1Q86WP2 473 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 CLVS1Q8IUQ0 354 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 FBXW8Q8N3Y1 598 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 RPGRQ92834 1020 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HEMGNQ9BXL5 484 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HIPK3Q9H422 1215 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PPCSQ9HAB8 311 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PARVBQ9HBI1 364 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 CYP4F11Q9HBI6 524 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 GNPTGQ9UJJ9 305 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ERVK-11Q9UQG0 969 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 NFASCO94856 1347 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TNS1Q9HBL0 1735 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 A6NL46 340 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 MCF2LO15068 1137 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 SLC16A3O15427 465 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 KDM1AO60341 852 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 H6PDO95479 791 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 SSTR1P30872 391 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 GRM5P41594 1212 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 SLC1A1P43005 524 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 FMO5P49326 533 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 NSMFQ6X4W1 530 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 GSDMBQ8TAX9 411 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ALKBH8Q96BT7 664 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 TAMM41Q96BW9 452 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 WDR83Q9BRX9 315 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 NUF2Q9BZD4 464 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 LOC105371267A0A1B0GV96 52 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 H0YIN7 160 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 H3BNH8 94 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 DNALI1O14645 258 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 CYP1A2P05177 515 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 CTSWP56202 376 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 PEX6Q13608 980 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 SEPT6Q14141 434 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ADGRE1Q14246 886 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 TEX44Q53QW1 395 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 FGD3Q5JSP0 725 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF280DQ6N043 979 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 C11orf74Q86VG3 221 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 SLC15A4Q8N697 577 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 TMCO5AQ8N6Q1 288 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 PPP1R14CQ8TAE6 165 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 LMO3Q8TAP4 145 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ACAP3Q96P50 834 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 WRNIP1Q96S55 665 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 VPS45Q9NRW7 570 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 QPCTLQ9NXS2 382 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 FETUBQ9UGM5 382 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 KIAA1024Q9UPX6 916 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ZNFX1Q9P2E3 1918 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 C7orf72A4D263 438 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 NOTOA8MTQ0 251 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF701M0R085 212 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 C8BP07358 591 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 CYP2D6P10635 497 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ETS1P14921 441 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ITGAXP20702 1163 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 RPA1P27694 616 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 CDH15P55291 814 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 CENPCQ03188 943 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 NDUFA5Q16718 116 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 RGS21Q2M5E4 152 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 TIGD2Q4W5G0 525 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 DEFB107AQ8IZN7 70 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF341Q9BYN7 854 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 ZHX3Q9H4I2 956 aa9.91□□□□□ -0.82
SF3A3-201ENST00000373019 RPF2Q9H7B2 306 aaKnown RBP9.91□□□□□ -0.82
SF3A3-201ENST00000373019 KCPQ6ZWJ8 1503 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 CROCCQ5TZA2 2017 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TRIM64BA6NI03 449 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TRIM64CA6NLI5 447 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 ENTPD3O75355 529 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 CHRNB1P11230 501 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 RPL10P27635 214 aaKnown RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 SLC12A3P55017 1021 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TXNL4AP83876 142 aaKnown RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 GAD2Q05329 585 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 SLC18A2Q05940 514 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 GALNT2Q10471 571 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 ZBTB17Q13105 803 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms