RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CDK18Q07002 472 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 AMIGO2Q86SJ2 522 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 BSNDQ8WZ55 320 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 FOXD2O60548 495 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 CSH1P0DML2 217 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 CSH2P0DML3 217 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 DPP6P42658 865 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 RARRES1P49788 294 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 TAZQ16635 292 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 DBN1Q16643 649 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 KLHL38Q2WGJ6 581 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 RCOR2Q8IZ40 523 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 ACTL9Q8TC94 416 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 E2F7Q96AV8 911 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 SH3GLB1Q9Y371 365 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 PSME4Q14997 1843 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 PTPRFP10586 1907 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 SERPINB7O75635 380 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 CIB2O75838 187 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 HNRNPCP07910 306 aaKnown RBP eCLIP12.13□□□□□ -0.472e-7■■■■□ 19.3
SMARCA1-201ENST00000371121 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC25A11Q02978 314 aaKnown RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 CD300CQ08708 224 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 TMED1Q13445 227 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 TEDDM1Q5T9Z0 273 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 SLFN13Q68D06 897 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 NCCRP1Q6ZVX7 275 aaPredicted RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 WDTC1Q8N5D0 677 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 FAM81BQ96LP2 452 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 GLT8D2Q9H1C3 349 aa12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 XPO7Q9UIA9 1087 aaKnown RBP12.13□□□□□ -0.47
SMARCA1-201ENST00000371121 TRIM49D1C9J1S8 452 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ADAM23O75077 832 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ITGB5P18084 799 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 SOX10P56693 466 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 DCTN2Q13561 401 aaKnown RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 GRAPQ13588 217 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 KCNJ11Q14654 390 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TAF5Q15542 800 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 AHI1Q8N157 1196 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 KBTBD7Q8WVZ9 684 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 MRPS26Q9BYN8 205 aaKnown RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ST6GALNAC4Q9H4F1 302 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 NDUFA13Q9P0J0 144 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNHIT2Q9UHR6 403 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 HEY1Q9Y5J3 304 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ZHX2Q9Y6X8 837 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 LY75O60449 1722 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 BPGMP07738 259 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 CYP24A1Q07973 514 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 CBLBQ13191 982 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TGFBIQ15582 683 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 BBS9Q3SYG4 887 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TAS1R3Q7RTX0 852 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 FEZF2Q8TBJ5 459 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 HAPLN2Q9GZV7 340 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TMEM206Q9H813 350 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 PCDHB2Q9Y5E7 798 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 C7orf72A4D263 438 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 KRT1P04264 644 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 MAPTP10636 758 aaKnown RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 GRM5P41594 1212 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 NSFP46459 744 aaKnown RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 ENTPD1P49961 510 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 OXCT1P55809 520 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 WASHC5Q12768 1159 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 CETN1Q12798 172 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 PSMD6Q15008 389 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 CNBD2Q96M20 576 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms