RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PFDN4Q9NQP4 134 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 C20orf96Q9NUD7 363 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 MYL2P10916 166 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 SKIP12755 728 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 UNGP13051 313 aaPredicted RBP8.77□□□□□ -1
PTPRK-206ENST00000368215 BEX3Q00994 111 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 BST2Q10589 180 aaKnown RBP8.77□□□□□ -1
PTPRK-206ENST00000368215 KBTBD12Q3ZCT8 623 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 MAP3K21Q5TCX8 1036 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 SLC27A1Q6PCB7 646 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 KCNT2Q6UVM3 1135 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 SLC26A11Q86WA9 606 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 PDCD6IPQ8WUM4 868 aaKnown RBP8.77□□□□□ -1
PTPRK-206ENST00000368215 PIK3R5Q8WYR1 880 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 EDEM1Q92611 657 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 THTPAQ9BU02 230 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 KRT82Q9NSB4 513 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 MID2Q9UJV3 735 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 L3MBTL1Q9Y468 752 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 MYPNQ86TC9 1320 aa8.77□□□□□ -1
PTPRK-206ENST00000368215 NHSL1Q5SYE7 1610 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 C17orf102A2RUQ5 167 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CASTOR2A6NHX0 329 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 C3orf70A6NLC5 250 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 GPR25O00155 361 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CCDC22O60826 627 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 AVILO75366 819 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 ERBB2P04626 1255 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 POLBP06746 335 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 TCF4P15884 667 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 MYLK4Q86YV6 388 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CKAP2Q8WWK9 683 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 ATXN2LQ8WWM7 1075 aaKnown RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 VPS39Q96JC1 886 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 L3MBTL3Q96JM7 780 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SPON2Q9BUD6 331 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 B3GNT5Q9BYG0 378 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 FRMD8P1Q9BZ68 369 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 GPR88Q9GZN0 384 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 XAB2Q9HCS7 855 aaKnown RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 A0A1W2PPM1 405 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 BNIP3LO60238 219 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CBX6O95503 412 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CD48P09326 243 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 PNPLA4P41247 253 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SERPINB9P50453 376 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CRADDP78560 199 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SLC6A3Q01959 620 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 USP10Q14694 798 aaKnown RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 LRRC38Q5VT99 294 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 PLPPR4Q7Z2D5 763 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SPATA2LQ8IUW3 424 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 FUKQ8N0W3 1084 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 DEFB106AQ8N104 65 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 BBS5Q8N3I7 341 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 GTF3C2Q8WUA4 911 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 PABPC5Q96DU9 382 aaKnown RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 GRIN2DO15399 1336 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 ARHGEF37A1IGU5 675 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 USP12O75317 370 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 GMNNO75496 209 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 FSBPO95073 299 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CYP1A1P04798 512 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CASP2P42575 452 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 TKTL1P51854 596 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 TPD52P55327 224 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 CUL3Q13618 768 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SLC12A1Q13621 1099 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 LRRC36Q1X8D7 754 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 RASIP1Q5U651 963 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 RGS9BPQ6ZS82 235 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 TMEM192Q8IY95 271 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 KIRREL3Q8IZU9 778 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 C1orf127Q8N9H9 656 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 COLGALT1Q8NBJ5 622 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SLC26A7Q8TE54 656 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 RXFP1Q9HBX9 757 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 ZDHHC18Q9NUE0 388 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 ANGPTL2Q9UKU9 493 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 SLC39A10Q9ULF5 831 aa8.77□□□□□ -1.01
PTPRK-206ENST00000368215 PRG3Q9Y2Y8 225 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-206ENST00000368215 LRP5O75197 1615 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PMPCBO75439 489 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TRUB2O95900 331 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ACVR2BQ13705 512 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TAF5Q15542 800 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 MFSD14CQ5VZR4 134 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TRIM67Q6ZTA4 783 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 BBS12Q6ZW61 710 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PRPF39Q86UA1 669 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ATPAF2Q8N5M1 289 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SLC25A41Q8N5S1 370 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ZNF75CPQ92670 426 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PPWD1Q96BP3 646 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 CENPTQ96BT3 561 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SGF29Q96ES7 293 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TEPSINQ96N21 525 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms