RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 ZC3H18Q86VM9 953 aaKnown RBP18.66■□□□□ 0.58
TRIM50-201ENST00000333149 LRRC71Q8N4P6 559 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 TTC17Q96AE7 1141 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 LRRC39Q96DD0 335 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 SPDL1Q96EA4 605 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 OXNAD1Q96HP4 312 aaPredicted RBP18.66■□□□□ 0.58
TRIM50-201ENST00000333149 SRPK1Q96SB4 655 aaKnown RBP18.66■□□□□ 0.58
TRIM50-201ENST00000333149 GPR20Q99678 358 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 SMYD3Q9H7B4 428 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM50-201ENST00000333149 PLLPQ9Y342 182 aa18.66■□□□□ 0.58
TRIM50-201ENST00000333149 BCLAF3A2AJT9 711 aaKnown RBP18.65■□□□□ 0.58
TRIM50-201ENST00000333149 KRT37O76014 449 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 CXCL8P10145 99 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 TGM2P21980 687 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 IL4RP24394 825 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 ZBTB16Q05516 673 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 FAM102AQ5T9C2 384 aaPredicted RBP18.65■□□□□ 0.58
TRIM50-201ENST00000333149 LGSNQ5TDP6 509 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 PRAMEF18Q5VWM3 479 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 MAP7D3Q8IWC1 876 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 PLD5Q8N7P1 536 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 MCUQ8NE86 351 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 MICAL1Q8TDZ2 1067 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 DNAJC9Q8WXX5 260 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 ZNF333Q96JL9 665 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 MIS12Q9H081 205 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 PLAC1Q9HBJ0 212 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 POPDC2Q9HBU9 364 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 FBXO6Q9NRD1 293 aaPredicted RBP18.65■□□□□ 0.58
TRIM50-201ENST00000333149 RAB6BQ9NRW1 208 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 ZFATQ9P243 1243 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 HMGXB4Q9UGU5 601 aa18.65■□□□□ 0.58
TRIM50-201ENST00000333149 TRIM49D1C9J1S8 452 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 H7C0C1 242 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 M0QYV0 167 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 B4GALT5O43286 388 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 MYL2P10916 166 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 CDC25CP30307 473 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 ATP5OP48047 213 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 OSTNP61366 133 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 TSNAXIP1Q2TAA8 658 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 BOLA3Q53S33 107 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 C4orf22Q6V702 233 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 RINLQ6ZS11 566 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 CDHR3Q6ZTQ4 885 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 LMNTD2Q8IXW0 634 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 TEKT4Q8WW24 435 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 RXFP2Q8WXD0 754 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 PRR11Q96HE9 360 aaPredicted RBP18.64■□□□□ 0.58
TRIM50-201ENST00000333149 NFKBIZQ9BYH8 718 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 SIRPGQ9P1W8 387 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 KIAA1257Q9ULG3 409 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 FZD1Q9UP38 647 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.58
TRIM50-201ENST00000333149 H0Y3Z8 333 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 FCHO1O14526 889 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 AVILO75366 819 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 NFICP08651 508 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 ESRRAP11474 423 aaPredicted RBP18.64■□□□□ 0.57
TRIM50-201ENST00000333149 VHLP40337 213 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 MRPS35P82673 323 aaKnown RBP18.64■□□□□ 0.57
TRIM50-201ENST00000333149 OCRLQ01968 901 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 MBTD1Q05BQ5 628 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 ACSBG2Q5FVE4 666 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 SH3PXD2AQ5TCZ1 1133 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 SLC9A4Q6AI14 798 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 CAND1Q86VP6 1230 aaKnown RBP18.64■□□□□ 0.57
TRIM50-201ENST00000333149 APLFQ8IW19 511 aaPredicted RBP18.64■□□□□ 0.57
TRIM50-201ENST00000333149 DHX37Q8IY37 1157 aaKnown RBP18.64■□□□□ 0.57
TRIM50-201ENST00000333149 TMEM192Q8IY95 271 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 RAB3IL1Q8TBN0 382 aa18.64■□□□□ 0.57
TRIM50-201ENST00000333149 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
TRIM50-201ENST00000333149 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 CAPN14A8MX76 684 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 LACTBL1A8MY62 500 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 ZNF487B1APH4 448 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 INO80B-WBP1J3KQ70 363 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 GPR25O00155 361 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 DPYSL4O14531 572 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 PRPSAP2O60256 369 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 RFPL1O75677 317 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 ATP5BP06576 529 aaKnown RBP18.63■□□□□ 0.57
TRIM50-201ENST00000333149 NEFHP12036 1026 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 PDGFRAP16234 1089 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 MAGEA3P43357 314 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 PSEN1P49768 467 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 RAP1GDS1P52306 607 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 INCA1Q0VD86 236 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 GRIK3Q13003 919 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 ORC1Q13415 861 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 LY6KQ17RY6 165 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 HSF5Q4G112 596 aaPredicted RBP18.63■□□□□ 0.57
TRIM50-201ENST00000333149 LCLAT1Q6UWP7 414 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
TRIM50-201ENST00000333149 VPS52Q8N1B4 723 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 PQLC3Q8N755 202 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 MTBPQ96DY7 904 aa18.63■□□□□ 0.57
TRIM50-201ENST00000333149 FAM167BQ9BTA0 163 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms